Humulus lupulus (common hop): 133806992
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Entry
133806992 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133806992
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlp03016
]
133806992
Enzymes [BR:
hlp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
133806992
Transfer RNA biogenesis [BR:
hlp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133806992
Prokaryotic type
133806992
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CTD5
New_glue
Motif
Other DBs
NCBI-GeneID:
133806992
NCBI-ProteinID:
XP_062101077
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Position
X:complement(212403005..212406321)
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AA seq
516 aa
AA seq
DB search
MENLDTAPPPPEQEPDSKKLKMSTTTTSDDEDTTTATTASANADDTKKPRYKRRKVAIFF
AYCGVGYQGMQKNPGAKTIEGDLEEGLYHAGAVPDHDRNNPKRYDWARSARTDKGVSAVG
QVVSGRFYVDPPGFIDRLNANLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVLALDP
NSHPNRESVMASLGSGNELFKCYECSERGRKVAGLMGKRNYELRGSSFELDISSNNENAK
VDAALSGEIGISLINGDASDPNSESLKEIKSENGDAGSNKVQDGILDSNEGNAAKDTTGE
VEEISGEEKTVKRSDFSYGENEKKRFNRILNYYVGTHNFHNFTTRTKAADPAAWRFIISF
NANTIVTVEGMEFVKCEVVGQSFMLHQIRKLIGLAVAVMRNCAPESLIEKALQKDVNMNV
PTAPEVGLYLDECFFTSYNQKWKDSHEELSMKEYEKEAEDFKMKHIYPHIALTEQKEGVV
ALWLHSLNHRNYPDLQVVNNENATNKISTDEETKVE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctggatacagctccaccaccgccggaacaagaaccagactccaagaagctt
aagatgtccacgacgaccacctcagatgacgaagacaccactaccgctactaccgcttcc
gccaacgccgacgacacaaagaaaccaagatacaagcgccgaaaggttgcaattttcttt
gcttattgcggtgtcggataccaaggtatgcagaaaaacccaggcgcgaaaaccatcgag
ggtgatcttgaggaaggactctatcatgccggcgccgttccggatcatgatcgaaacaac
cccaaacgatatgattgggctcggtcggcccgtactgataagggcgtcagcgctgtgggg
caagtagtctcggggagattctacgtggatccacccggctttatcgaccgcctgaatgcg
aacctttccccgcagattcggatattcgggtacaagcgtgtgacgggttcgtttaatgcc
aaaaagttctgtgatcggagaaggtatgtgtatcttattccggtgctcgctcttgatcca
aattcgcatcctaacagggagagcgtaatggccagtttgggatctgggaatgagctcttt
aagtgctatgaatgctctgagagggggcgcaaggttgctgggttaatgggcaagcgtaat
tatgaattaagaggttcgagttttgagctggacatatcgtcgaacaatgagaatgctaag
gtagacgctgcacttagcggcgaaattggcatttctttaataaatggtgatgccagtgat
ccaaattcggagtccttaaaggaaattaaatccgaaaatggggatgctggaagcaacaag
gttcaagatggaattttggactcgaacgagggtaatgctgcgaaggacactactggcgaa
gtagaagagattagtggagaggagaagactgtaaagagaagtgatttctcttatggtgag
aatgagaaaaaaagatttaatagaattctgaattattacgtggggactcataacttccat
aactttaccaccagaacaaaagcagcggaccctgcagcatggcgcttcatcatttcgttt
aatgctaacaccatagttactgttgaaggcatggaatttgtcaagtgtgaagtggtggga
cagagcttcatgcttcatcagatcaggaagttgattgggcttgctgtggcggtgatgagg
aactgtgcccctgagtcattgatagagaaggccctacaaaaggatgttaacatgaatgtg
ccaacggcccctgaagttgggttgtacttggatgagtgtttctttacatcatataaccaa
aagtggaaagacagtcatgaagagctatcgatgaaagagtatgaaaaagaggcagaagac
ttcaaaatgaagcatatataccctcatattgcattgacggagcagaaagaaggtgtggtg
gctctatggttgcactctctaaaccatcgaaactatccagatttacaagttgttaataat
gaaaacgcaactaacaagattagtactgatgaagagaccaaggttgagtga
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