Humulus lupulus (common hop): 133807114
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Entry
133807114 CDS
T11341
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133807114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133807114
Spliceosome [BR:
hlp03041
]
Common components
Common spliceosomal components
SR proteins
133807114
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133807114
NCBI-ProteinID:
XP_062101258
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All DBs
Position
X:237105882..237109042
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AA seq
256 aa
AA seq
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MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDRYGKVVDVFIPRDRRTGESRGFA
FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERIHKGRIIESESKLGSRSRSR
SPRPRHRDENRDRDRDRRRSRSRSRDRYDRDRHHKEHRHRSRSRSASPDHHKDRGRSKYD
DEHHSRSRSYGSTSPARRSHSPKSRRSPSPRRTPSRGENPEIRDLNEHSPASKDASPRGR
SVDSQSPSPCRSDADD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggagatctggtccaccggacatcagagacacctattcccttctcgtc
ctcaacattactttccgaactaccgcagacgatcttttcccgctcttcgaccgctacggt
aaggtcgtcgacgtctttatccccagagaccgaaggactggggagtcgcgcgggttcgcg
tttgttcggtacaagtatgcggatgaggctcagaaagccgtggagaagcttgatggaaga
gttgtagatggtagagagattatggttcaatttgccaagtatggccccaatgctgaaaga
attcataaggggaggataattgaatcggaatcaaagcttggaagcaggtcaagaagccgt
agccctcgcccaaggcatcgtgatgagaatcgggatagggatagggacaggaggagaagc
cgcagtcgaagtagggatagatatgaccgggacagacaccataaggaacaccgtcatcgt
agcaggagccgtagtgctagtccagatcatcacaaagatcgcgggaggtccaaatatgat
gatgaacatcacagtcggagccgttcctatgggagtacctcccctgctcggcgtagtcat
agtcctaaatctcgcaggagcccatctcctcgtaggacaccttcaagaggtgaaaaccct
gaaatacgcgaccttaatgaacactctcctgcttcaaaagatgcttccccacgtggtaga
tcagttgattctcaaagcccttctccttgtagatctgacgcagatgattga
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