Humulus lupulus (common hop): 133807219
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Entry
133807219 CDS
T11341
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133807219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlp03016
]
133807219
Enzymes [BR:
hlp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
133807219
Transfer RNA biogenesis [BR:
hlp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133807219
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
133807219
NCBI-ProteinID:
XP_062101387
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Position
X:22580592..22608241
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AA seq
1071 aa
AA seq
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MAILAFPLVISFLKPQASRITFHLYAAKSFPTRFPKPFAASRRFAGTPVSAKSASSATAE
APQHSNSEPRKSSVLTFQQAIQRLQEYWASVGCAIMQCSNTEVGAGTMNPLTFLRVLGPE
PWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIGSLSALGIDVRAH
DIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPISVEITYGLERILM
LLQGVDHFKKIQYADGITYGELFMENEKEMSAYYLEHASVEHLQKHFDFFEEESRFLLAS
GLPIPAYDQLLKTSHTFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRETLEYPL
GVVSEPVSLVCPKELLEAAVKRVGDNSRLFVLEIGTEEIPPQDVVDASQQIKDLMLQFLD
KQRLSHGEVEAFGTPRRLVVFVEDLCTKQEENEVEVRGPPASKAFDDQGNLTKAGVGFCR
RYSVPLDALYRKVDGKTEYLYARIKESSRHAVEVLSEDLPNAIAKISFPKSMRWNSQVMF
SRPIRWILALHGDVVVPFTFAGILSGNNSFGLRNSPSATFMVETAESYVDQIKDTGINIE
IEKRKKTILEQSNALAKSVEGHVVFQEGLLNEVANLVEAPVPVLGEFKESFLELPSDLLT
MVMQKHQKYFALTDANGKLLPYFIAVANGVIDEKVVRKGNEAVLRARYEDAKFFYELDTR
KRFSEFRSQLKGILFHEKLGTMLDKMIRVQNMVEKLSLALKIDNNMHRVVKDAASLAMSD
LATAVVTEFTSLSGIMARHYALRDGYSEQISEALFEITLPRFSGDLLPKTDVGIVLSIAD
RLDSLVGLFAAGCQPSSSNDPFGLRRISYGLVQVLVENDKDLDLKEALQLAADVQSFKVE
ADIVDNAHQFVIRRLEQFLVDKGTSSEVVRSILAERANIPSLAAKSAIKMDTLSKGKLFP
KVIEAYSRPTRIVRGKNADSEVEVDEAIFETKEEKALWNAFLSVRSKINSGVDVDDFIDA
SSELLQPLEDFFNNVFVMVEDERIRNNRLAVLNKIADLPRGIADLSVLPGF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggctatactggcctttcccctggtcatttcctttctcaagccccaagcctctcgcatt
accttccacctctacgctgccaagtccttccctacccgcttccccaagccattcgccgca
agccgccggttcgcaggaactcccgtctctgcaaaaagtgcctcctcggccaccgcggag
gcgccgcagcattcgaattcggagccacgtaaatcctccgttcttactttccagcaagcc
attcaacgtctccaggaatactgggcgtccgttggatgtgccataatgcaatgtagcaac
actgaggttggtgctgggactatgaatcctttgactttcttaagggttcttggtccagaa
ccgtggaatgttgcatatgttgagcctagtatccgaccagatgatagtcgctatggggaa
aaccccaacaggctccaaagacacactcaatttcaggttatattaaagcctgatccagga
aattcacaagacctttttattggaagcctttcagctttaggtattgatgttcgtgcacat
gatataaggtttgtggaggacaactgggagagtccggtgcttggtgcttggggtctggga
tgggaaatatggatggatgggatggagattacccaattcacctacttccagcaggctgga
agtcttcaattgtcaccaatttctgttgaaatcacttatggccttgagcgtatcctcatg
ttactacagggagttgaccattttaagaaaattcagtatgcggatggaattacttatgga
gagctatttatggagaatgagaaagaaatgagtgcatactatttagagcatgccagtgtg
gaacatcttcagaaacactttgatttttttgaggaagaatcccgtttcttgcttgcttct
ggtctaccaatccctgcgtatgatcagcttctgaaaacatcacatacttttaacatctta
gactctagaggctttgttggggtgacagagcgtgctcgatattttggtcggatgcgtagt
ttagctcgtcagtgtgcacaactatggttgaagaccagggagacccttgaatatccattg
ggtgtagtttctgaacctgttagtcttgtatgtcctaaagagcttctggaggcagctgtg
aaaagggttggtgataattcaaggttatttgtacttgaaattgggactgaagagatacca
cctcaagatgttgttgatgcaagccagcaaataaaggatttaatgctgcaattccttgat
aagcaaagattgagccatggagaagtggaagcctttggcacgcctcgtagactggtggtt
tttgttgaggatctttgtaccaaacaagaggagaatgaggttgaggttcgaggacctcct
gcttcaaaagcatttgatgatcaaggaaatcttaccaaggccggtgtgggtttttgtcgt
aggtattctgtaccactcgatgcactgtatagaaaggttgatggaaaaacagaatacctt
tatgctcgtattaaggagtcttcacgacatgctgtggaggttttgtccgaagatttgcct
aatgctattgctaaaatatcattcccaaagtcaatgcgctggaattctcaggttatgttt
agcagacccattcgatggatattggcgctccatggagatgtagttgtgccatttacattt
gctggaattttaagtgggaacaattcctttggtcttcgcaactctccttcagctacattt
atggtagaaacagcagaatcttatgtggatcagataaaagatactggaataaatattgaa
attgagaaacggaagaaaacaattttggagcagtccaatgcattagccaaaagtgtagag
ggacatgtggtttttcaggagggcttacttaacgaggttgcaaatctggttgaggcccct
gttcctgtccttggagagttcaaagagtcctttctagagcttccaagtgaccttctgact
atggttatgcagaaacatcaaaagtattttgccttaactgatgcaaacggaaagcttttg
ccttacttcattgctgtggcaaatggagtaattgatgaaaaggtggtgagaaaaggaaat
gaagctgtacttagagcgcgctacgaagatgcaaaatttttttacgagttggacacacgg
aaaagattttcagaattccgaagccaactgaaagggattctttttcatgagaagctagga
acaatgctggacaagatgattcgtgtacaaaacatggttgagaaactaagtttggccctg
aaaattgataacaatatgcatcgagttgtcaaagatgcagcatcacttgctatgtctgat
cttgctactgcagtcgttacagaatttacatctctttctggaataatggcccgtcattat
gctcttagagatggctattcggagcagatatcagaggctttgtttgagatcactcttcct
agattctcaggagatttacttcctaagactgatgttgggattgttttgtctatcgctgac
agattagatagtctagttggcctatttgctgctggctgtcagcctagctccagtaatgac
ccatttggtctgcgaagaatctcatatggtcttgtccaagtcttggtagaaaatgataaa
gatctggacttgaaagaagctttgcaacttgctgcagatgttcagtccttcaaagtagaa
gctgatattgtagataatgcgcatcaatttgtcatccgtagattagagcaatttttggtt
gacaagggtacaagttctgaagtggttcgttctatcctcgcagagcgagccaacattcct
tctctggcagcaaagtctgcaattaaaatggataccttgtcaaaagggaagctttttcct
aaggtaatagaagcatattctcgtcccaccagaattgttcgtggaaagaatgcagactct
gaagttgaggtggacgaggctatctttgagacaaaagaggagaaagctctatggaacgct
ttcctatcagttagaagcaaaataaattcgggtgttgatgtcgatgactttattgatgca
tcatcagagcttcttcaaccacttgaggatttcttcaataacgtctttgtaatggtggag
gacgaaagaattcggaacaacaggcttgccgtgctcaacaaaattgctgaccttcctaga
ggcattgctgatctttcagtgttgcctggattttag
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