Humulus lupulus (common hop): 133807448
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Entry
133807448 CDS
T11341
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133807448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133807448
03036 Chromosome and associated proteins [BR:
hlp03036
]
133807448
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133807448
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133807448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
133807448
NCBI-ProteinID:
XP_062101772
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All DBs
Position
X:complement(7422051..7427612)
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AA seq
724 aa
AA seq
DB search
MPVIASISGEARGVSNASNGAIVPSSSEVRQPVVYPLRHGVKPPITRLSISWSRGNTLRV
SVLRPPSEQNSEDGETGGRVLEVRLSNGDSEISDAQWRRISYGSVSPFALLQSRRSSMSS
LSKMSMSPSSYQFEWWEYVMEYSKEIGSLLGNSKSAADSVIEDSSIILKTVEEPTCLKAA
WELMEIFYADKHSQPWLPERLVDWLTDYDCLLSSTQTTIHSKLVGFQKKLVNLQVVEDDS
RYWEAISSALAIGWLELVVKMLRLHGSYQIDQLGNRETENGLVEAVAVLISKMPRMRVEL
SEGKLGECYKVKPDYMKAWEKWRAQITKLDSSAFWVQCNHQLTREGLKNMLQIMLGNSNS
LCDATCHWLELYISNLLYIRPFTMGLESMYSLAQKCMQLKPSSNAHRLIELMIGILGENT
EVVLAECSRAFGPWMVAHAIELLTAGSDQAEVLLHEERDNLGEISIAELHRLVYAQVLSS
HVLTWQIAPIYLISCMKQGMGLLELLLYKQPVQNNELLLKNIEICRLYDLDSVSSNIMKI
AGVYHWKHGRKGSGVFWLQQARDEVCLNRIAQHLFDSVGKSISDESFKQWEGLIELLGSE
TKAAGGLEFLHKYRDFKKSLKQVQVGKTSDSTKQAVESLISLMKNTSTPPRFWLPLLYDS
LKLLNWQERPLLSVPQTNLLLNKLQELSMARLRPDFTEVDLPQQALSSVRLALATNLGRA
ILEE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcatcgcatccatctccggcgaagctcgaggagtttcaaatgcatcaaacggt
gctatagttccgtcatcatctgaggtccggcaaccagtggtctatcccctccgtcatggc
gttaagcctccaatcactcgcctctcaatatcctggtcacgaggaaacacactccgcgtt
tcagtactccggccaccttctgaacagaattccgaggacggagaaaccggcgggagagtg
ttggaggtaaggcttagtaatggagactccgagattagtgatgcacagtggcggaggatc
tcgtacggttcggtctcgccgtttgctcttctacagagtcggaggagttccatgtcgagc
ttgtcgaaaatgtctatgagtccatcgtcttatcaattcgagtggtgggagtatgtaatg
gagtatagcaaggagatcggttcacttcttggtaattcaaaatcagctgctgatagtgtg
attgaagactccagcataattttgaagacagttgaggagcctacctgcttgaaagctgca
tgggagttgatggaaatattttatgcagacaagcattctcaaccatggctaccggagcgg
ctcgttgattggttaactgattacgattgcctcctttccagtacacagaccacaatccat
tcaaaacttgtgggttttcagaaaaaacttgtcaatttgcaggttgttgaagacgactct
agatattgggaggcgatatcatcagcactagcaattggctggctggaacttgtggttaaa
atgctgcgcttacatggatcttatcaaatcgatcagctcggaaatcgtgagactgagaat
gggctggtggaggcagttgctgttctcatatcaaaaatgccacgcatgcgtgttgaacta
tcagaaggaaagttaggtgaatgctataaagtgaagcctgattatatgaaggcatgggaa
aaatggagggcacaaattactaagctggactctagtgcattctgggttcagtgcaatcat
caattgacccgagagggcttgaaaaatatgctacaaatcatgcttggaaacagtaacagt
ctttgtgatgcaacatgtcattggttagaactgtatatttccaaccttctatacatcaga
ccattcacgatgggtctagagagcatgtatagcttagcccagaaatgcatgcagttgaaa
ccttcatccaatgcccatagattgatagaacttatgattggaattctgggagaaaatact
gaggttgtcttggcagaatgttcgagagcatttggcccttggatggttgctcatgctata
gagttgttgactgctgggagtgatcaagcagaagttcttttacatgaggagcgtgataac
ttgggagaaattagcatagcagaactacaccggcttgtatatgcccaagttttgtcttct
catgtattgacctggcaaattgctccaatatatctgatttcatgcatgaagcaaggaatg
gggttgttggagcttttgttgtataagcaacctgttcaaaataatgaactgcttctcaag
aatatagagatatgccgactatatgatcttgatagtgttagttcaaacattatgaagatt
gctggagtgtaccattggaagcatggtaggaaaggttctggagttttctggcttcagcag
gctcgagatgaagtttgtcttaacaggattgctcagcatttgtttgattctgttggaaag
tcaatatctgatgaaagtttcaagcaatgggaaggcttaattgaattgctgggttctgag
actaaagctgccggaggccttgaatttttgcacaagtatagagattttaaaaagtccctc
aagcaggttcaagttggaaaaactagtgattctaccaagcaagctgtagaatctctcata
tcgcttatgaaaaacacttctacacctccccggttttggctgcctctattgtatgattcg
ttgaagttactaaattggcaggaacgccctttgttaagcgttcctcagacaaacctctta
ctgaataaactgcaagagttatccatggcaaggctgcgtccggacttcacagaagtggac
ttaccacagcaggccttgagttctgttaggttagctcttgcgacaaatctcggtcgcgct
atcttggaggaataa
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