Humulus lupulus (common hop): 133812578
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Entry
133812578 CDS
T11341
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp00900
Terpenoid backbone biosynthesis
hlp01100
Metabolic pathways
hlp01110
Biosynthesis of secondary metabolites
Module
hlp_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133812578
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hlp01006
]
133812578
Enzymes [BR:
hlp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133812578
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133812578
2.5.1.29 geranylgeranyl diphosphate synthase
133812578
Prenyltransferases [BR:
hlp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133812578
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
133812578
NCBI-ProteinID:
XP_062102339
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All DBs
Position
1:complement(302213377..302215107)
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AA seq
369 aa
AA seq
DB search
MSSVNLTWVQTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPTSSFSSISAVL
TEQEAVTEDEEQKSTFNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRV
RPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGE
DVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLA
NVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQVVDDILDV
TKSSQELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLCGFDPQKAAPLIAL
ANYIAYRQN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtgaatcttacatgggttcaaacctgttccatgttcaaccaagcaggtaga
tccagatcctcaactttcaatctcctccactaccatcctttgaaaaaagtacctttttca
ttccaaaccccaaaacaaagacgacccacttcatctttttcatccatttccgcagtcctg
accgagcaagaagccgttacagaagacgaagagcaaaaatccaccttcaatttcaagtca
tacatggtccagaaggccaactcagtcaaccaagctttagacgctgccgttttgctccgt
gagccccagatgatccacgaagccatgcgttactctctcctggccggagggaagcgagtt
cggcccgtgctatgtctctcagcctgtgagctcgtcggtggcgacgagtccgtggccatg
cccgccgcctgcgccgtcgagatgatccatactatgtctctgatccacgacgacctccct
tgtatggacaacgacgacctccgccgtggaaagcccactaaccacaaggtcttcggcgaa
gacgtcgccgttttggccggggacgcactcttggcctatgctttcgagcacgtggcggtt
tccaccgttggtgtcccagcggccaggattatccgggccataggtgagctggccaagtca
attgggtcagaaggactcgtggctgggcaagtggttgatattgattcagaaggtttggct
aatgttgggcttgagcaacttgagttcatccacctccacaagacggcggcgcttctggag
gcttcggtggttttgggagccattcttggtggtggcactgatgagcaagttgaggaactg
aggagcttcgctaggtgtattgggctgctgtttcaggttgtggatgacattcttgatgtg
accaaatcttctcaagaattgggtaagacagcagggaaagacttggtggctgataaggct
acttatccaaggctaatggggattgagaaatcaagagagtttgctgagaaattgaacaga
gaagcccaagaacatctctgtggttttgatccccaaaaggcagctcctttgattgctttg
gctaattatattgcttataggcaaaactaa
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