Humulus lupulus (common hop): 133812762
Help
Entry
133812762 CDS
T11341
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
KO
K14962
COMPASS component SWD2
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133812762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133812762
03036 Chromosome and associated proteins [BR:
hlp03036
]
133812762
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133812762
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
133812762
COMPASS/SET1 complex (yeast)
133812762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133812762
NCBI-ProteinID:
XP_062102562
LinkDB
All DBs
Position
1:complement(307977137..307984191)
Genome browser
AA seq
331 aa
AA seq
DB search
MRKGPEREDKVSLELTEEILQGMEVGMAFKDYSGRISSIDFHKTSPYLVTASDDESIRLY
DVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH
DRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFSVAFG
GYIRMFDARMYEKGPFDIFSVGGDISDANVIKFSNDGRLMLLTTMDGHIHVLDSFRGTLL
STYNVKPVSKNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSAENEPPVIKW
APGNLMFVTGSSELSFWVPDLSKLGAYVGRK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaggtcccgaaagagaagataaggtctcattggagctcaccgaggaaattctt
cagggcatggaagttggcatggctttcaaagactacagtggtagaatcagttcaatagac
tttcacaaaacatccccttatctggttactgcaagtgatgatgagtccattcgcttgtat
gatgtagcaagtgcaacttgcttgaaaacaattaacagcaaaaagtatggagttgatctt
gtttgctttacatctcaccctacaacagtcatttactcttcaaaaaatggttgggatgaa
tccttgaggcttctatcattacatgacaataagtacttgcggtattttaaaggtcatcat
gacagggttgtatctcttagcttgtgtgctcgcaaggaatgctttatctcaggctctctt
gatcgaactgttttgctttgggatcaacgagctgaaaaatgccagggtcttttacgtgtg
caaggaaggcctgctacagcatatgatgaccaagggctagttttctcagttgcctttggt
ggatacatacgaatgtttgatgctcgcatgtacgaaaagggtccttttgacattttttct
gttggaggagatatttctgatgctaatgttataaagttcagtaatgatgggagactaatg
cttttgacaacaatggatggacatatacatgtacttgattcttttcgcggtacactttta
tcaacatacaatgtaaaaccagtttcaaaaaattccacattagaagcttctttcagccct
gaaggaatgtttgttatatctggttctggtgatggtagtgtttatgcttggagtgtccga
agtgggaaagaagttgcaagttggatgagtgctgaaaatgagcctcctgtcatcaaatgg
gctcctggaaatcttatgtttgtgactgggtcttctgaactgtcattctgggttccagat
ttgtccaaacttggagcttatgttggaaggaagtag
DBGET
integrated database retrieval system
