Humulus lupulus (common hop): 133812794
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Entry
133812794 CDS
T11341
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133812794
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hlp01009
]
133812794
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133812794
Protein phosphatases and associated proteins [BR:
hlp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133812794
Spliceosome [BR:
hlp03041
]
Common components
Common spliceosomal components
SR proteins
133812794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
133812794
NCBI-ProteinID:
XP_062102599
LinkDB
All DBs
Position
1:complement(308445072..308447802)
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AA seq
253 aa
AA seq
DB search
MADSPRKRVSHSPSPRRAPSRSRSRSRSWSRPVSRSRSRSWSRPRPRSRSRSRGRSRSRS
HGRPEAVNPGNTLYVTGLSTRVTERELEDHFSREGKVASCFLVVEPRSRVSRGFAFVTMD
NVDDAERCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRDHGYRGGGGGDRD
RDRGGGDRDRDRSRYRGGGGGRDDYGYRRSPRRSPYRGGRDYSPRHSSPYGGRSRRDRSR
SPYGSPERKYVRG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctcctcgcaaaagggtctcacattctccttccccacggagagctccatcc
aggtccagatcaaggtctaggtcttggtcaagaccagtatctaggtcaagatctcgatcc
tggtcaaggccgaggcctaggtcccgatctcgaagccgtggcagatcaaggtccagaagt
catggcagacctgaagctgtaaatcctggaaatacactatatgtgactggtctttcaaca
agggttacagaaagggaactcgaagaccacttctcgagagaaggaaaggttgcttcatgt
tttctggtggtggagcctcgttcgcgtgtttcccgtggttttgcctttgttacaatggac
aatgtcgatgatgctgagcggtgcatcaagtatctcaatcaatcagttctagaaggccga
tacataactgtggagaggtctcgaaggaagcgagcaaggactccaacgcctggccactat
cttgggttgaaaagcaccagagaccacggctaccgtggtggtggcggtggtgatcgtgac
agggatcgtggtggtggtgatcgtgatcgtgatcgcagtaggtatcgtggtggaggcggg
ggtcgtgatgactatggatatcgtaggtccccaagacgctcaccatatcgagggggtcgt
gattattctcccaggcattcttctccttacggcggaagatcaaggagggaccggtcaagg
tcaccttatggcagcccagaaaggaaatatgttagaggttga
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integrated database retrieval system
