Humulus lupulus (common hop): 133812866
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Entry
133812866 CDS
T11341
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133812866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hlp04131
]
133812866
Membrane trafficking [BR:
hlp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
133812866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
133812866
NCBI-ProteinID:
XP_062102677
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All DBs
Position
1:309860043..309866335
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AA seq
794 aa
AA seq
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MITDGAEDEEKWLSAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YALYMRAFDELRKLEMFFKEEARRGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIRSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVVDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGIDLEMYKESVLP
RVLEQVVNCKDEIAQFYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSQLME
RLSNYAASSSEVLPEFLQVEAFSKLSNAIGKVIEAQVEMPTVGVVTLYSSLLKFTLHVHP
DRLDYADQVLGACVKKLSGKGKIEDNRATKQIVALLSAPLEKYNDIVTTLKLSNYPHVME
YLDNETNKVMATVIISSVMKNKTHVSTADKVEALFELIKGLIKDLEGNSDDEIDEDDFNE
EQNSVARLIQMLTNDDPEEMFKIICTVREHILTGGPKRLVFTVPPLFFSSLKLVRQLQGQ
EENPFGDDTATSPKKIFQLLNQTIEALSIIPAPELALRLYLQCAEAANDCELEPVAYEFF
TQAYILYEEEISDSKAQITALHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYSCAHLFWVDDQENMKDGERVLICLKRALRIANAAQQMSSAARGSAGSVTLFVEILN
KYLYFFEKGNPQITVASIQSLMELITTEMQSDSSTPDEATDAFFTSTLRYIEFQKQKGGA
MGDKYEPIKASSIA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagacggagccgaagacgaagagaaatggctgtccgccgggattgctggcctc
cagcagaacgctttctacatgcatcgcgctctggattcgaacaatctccgtgatgcccta
aaatattctgctcagatgctctctgagcttcgaacttcgaagctttctcctcacaagtac
tacgcgctctatatgcgagcatttgacgagttgaggaagttggagatgttctttaaggag
gaggctcgacgaggttgctctgttattgatctgtatgaacttgtgcagcacgcgggtaac
atattgcccagattgtacctcctctgtacagttggatccgtttatatcagatctaaggaa
gctcctgccaaggatgttcttaaagatctggtggaaatgtgccggggaatccagcatcct
gtacgcgggcttttcttaaggagttacctctctcaagtcagcagggacaaattgcctgat
ataggttctgaatatgaaggtgatgcagacaccgttgtggatgctgtggagtttgtactt
caaaatttcacggagatgaacaaactttgggtgcggatgcaacatcagggacctgcccgg
gaaaaggagaaacgggagaaagagcggagcgagctacgtgatcttgttgggaagaacttg
catgtcctcagtcagatagagggaattgatctcgagatgtacaaagaatctgttcttcct
agagtccttgagcaggttgtcaattgtaaagatgagattgcacaattctatctgatggat
tgcataattcaagtattccctgatgagtatcacttacaaactcttgatgtattgttgggt
gcttgcccccagcttcagccatctgttgatatcaagacagtgctatcccagttgatggaa
aggctttcaaactatgctgcttcaagttcagaagtgttgcctgagttcttgcaagtagaa
gctttttccaaattgagcaatgccattgggaaggtgatagaagctcaagttgagatgcct
actgttggagttgtaacattgtattcgtcgcttcttaaatttactcttcatgtacaccct
gatagacttgattatgcagatcaagtattgggagcatgtgttaaaaaactttctggcaaa
gggaagattgaagacaacagggcaacaaaacagattgttgcacttctaagtgctccactt
gagaaatataatgatattgtcactaccttgaagctttcaaattatccccatgtgatggaa
tatcttgataacgaaacaaataaagtcatggctacagttattatttcaagcgttatgaaa
aataagactcatgtatcaactgctgacaaggtggaagctttgtttgaactaataaaaggg
cttattaaggacttggaaggaaattctgatgatgagattgatgaagatgatttcaatgag
gagcaaaattctgttgctcgacttattcagatgctcactaatgatgatccagaagagatg
ttcaagattatatgtactgtgagggagcacatacttactggagggccgaagcgtttagtt
tttacagttcctcccttatttttctcttccctaaagttggttaggcaattgcaaggccag
gaggaaaacccttttggagatgacacagcaacttcaccaaagaaaatatttcagctttta
aatcagaccattgaggctctatcaatcattccagcaccagaactggctttaaggttgtac
ttgcaatgtgctgaggctgcaaatgactgtgagctagaacctgttgcgtatgaatttttc
acccaagcgtatattttgtacgaagaggaaatctcggattcaaaagcacaaataaccgca
ttacatttaataatcgggacccttcaaaggatgcacgtctttggtgttgagaacagggat
actttaacacacaaggctacagggtattctgcaaagcttttaaagaagcccgatcagtgc
agagctgtttattcttgtgcacatctcttttgggttgatgatcaggaaaacatgaaggat
ggggagagggttttaatatgcctgaaacgggctctgaggattgcaaatgctgctcagcaa
atgtcaagtgcagcccgcggtagcgctggttcagtaacactttttgttgagatattgaac
aagtatctctatttcttcgaaaagggaaacccgcagataactgttgcttcgatccaaagc
ctgatggagttgattacgactgaaatgcagagcgactctagcacgccagatgaggctacc
gatgcgttcttcacaagcacattgcggtacattgagtttcagaaacagaaaggcggtgcc
atgggagataaatacgagccaattaaagcttcttcaattgcttga
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