Humulus lupulus (common hop): 133816844
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Entry
133816844 CDS
T11341
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hlp03036
]
133816844
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133816844
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
133816844
NCBI-ProteinID:
XP_062105135
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Position
2:1928599..1939244
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AA seq
1177 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEMFQGNYVDHHVSARDQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGFDLDEDL
FLGKVAAQDNDGIPDGDLQASAPPMTPEEKDVMHEGIEGMSRTTEIMDVDGTGDQIEVTD
ADIEAFEHAEDPSTPGFVEHSSLSKFEGPLNFDGHLESKDHDLLEFEGPEDADNDISKCD
AHETVAPLENGCLLSEVETKQANLQLHSASIPVATENISADNGVSTPLAAVEHDKPIPLA
PECSNGNINAVDGPVRVEDIHNGVVINERTRHIGDGTDVQCPESPGVRLEETVASPSCSQ
VTTELEDPGRQTSSIDVETHNMGESCSPSNALLTNVVCPPESPGRPEVVNVEGQTSQEPI
ETNTLNHATHDFIASIDFPGLHACTQKELDVSSFGGEESHSIDVIRPDTENKQLSEPALW
VETPADCRKLDEEMANVASCDIQLENFDRSVALDLPAPEKLLSFTDGFTSKPNDLLMEST
PRVDESGAGIKITTGKKRSFTESTLTVHSLNSSDSFNMTRLNRTTESIPDDNDLLSSILV
GRKSLVLKMKPTPPVPETISTKRLRSARRASASKRKVLMDDMMVLHGDMIRQQLTNTEGI
RRLRKKAPCTSQEISMIQRQFLEAEIFNQPSFTGMSTALIFLHHEKFDLSRIRVCENDQS
SDPVELTKNVESSVFVRSDLETQFVNIPIQSEIQHAENIDFRSQHENLGVVAEMEIDVQN
IEVADAANHSVNGLESSIQIEPDSNDIANKMTENIVQGDLVDKSNGVDASAPMDTSCMSP
QKFETEPIEETSLADTSNGRVDAIEDIGHGVEFSVDPEKDNFNLHASLVETEGYDIMLSG
PGDQAVEVHENNDFSIMNPDEVQAPEEVREDKDLAFSCMQADGANLDSSLPLELNVDVEN
APLNEGENADVKEIDVNEGITADSSAMELRADYEDDVTVGNDTEFLNVDDDDVEEDYEDD
DDMPGAEDTRILENTGWSSRTRAVAKYLQTLFDKESVHGKRVLPMDNLLTGKTRKEASRM
FFETLVLKTKDYINVEQEMPFDNINVKPRIKLMKSDF
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgttttactctcagtttatcttggccaagaaaggtccacttgggacgatatggattgcg
gcccatttggagaggaagctccgcaagaatcaggttgcagacaccgatatcggagtctca
gtagattcaattctttttcctgatgttcctatagcactccggttgtccagccatctttta
cttggagttgttaggatatattcaagaaaggtgaactacctttttgatgattgcagtgag
gctttgcttaagataaagcaagcttttcgttccactgcagttgatttgcctccagaagaa
tctactgcaccatatcattccatcaccttgccagaaacttttgaccttgatgattttgag
cttccagataatgaaatgtttcagggtaactatgttgatcatcatgtcagtgcaagagat
cagattacacttcaagataccatggaaggtgttgtttactcaacatctcagttcggattg
gatgagcgatttggcgatggtgatacttctcaaattggtttcgacctggatgaggacctt
ttcttaggcaaggttgctgcccaagataatgatggaattccagatggtgatctgcaggca
tcagctcctccaatgacacctgaagaaaaagatgtaatgcatgagggcattgaggggatg
tctagaactacagaaataatggatgtggatggcactggggaccagattgaagtcactgat
gcagatattgaagcttttgagcatgctgaggacccatctactcctggatttgtggaacat
tcaagcctgtccaagtttgaagggcctctgaactttgatggtcacttggaatcaaaagac
cacgatttattagaatttgaaggacctgaagatgcagataatgatattagtaagtgtgat
gcccacgaaactgttgctcctttggagaatggctgccttttgagtgaagtggagacgaaa
caagcaaatttgcagcttcattcagcatctattccagttgctacagagaacatctctgct
gataatggggtttcaacaccattagctgctgttgagcatgataaacctattcctctggct
ccagagtgttcaaatggaaacattaatgcagtggatggtccagtcagggtggaagacata
cacaatggtgttgttataaacgaaagaactagacacattggtgacggaacagatgtacaa
tgccctgaatctcccggagttagattggaggaaactgttgcatctcctagctgctcccag
gtgaccacagaactggaggatcctggtcgtcagacttcgtcaattgacgttgaaactcac
aacatgggagaatcatgctcccctagcaatgcattgttaacaaatgttgtttgtccacct
gagtcacctgggagaccagaggttgtgaatgttgaaggtcagacttctcaagagccaata
gaaacaaatactttgaatcatgctactcatgatttcattgcatctattgattttcctgga
ctccatgcctgcactcagaaagaacttgatgtatcatcttttggaggtgaagagagccat
tcaattgatgttataagaccggacacagaaaataaacagctttctgaacctgctttatgg
gtagagactccagctgactgcaggaagttggatgaagaaatggctaatgtagcatcttgt
gatattcagttagagaattttgacagatctgtggctttagacttacctgcccctgaaaag
ctgctctcttttactgatgggtttactagtaaaccaaatgatttgttgatggagtccaca
cctagggttgatgagagtggtgctgggatcaaaattacgacaggaaagaaacgtagcttc
acagagagtactttgactgtacatagtttaaactcgagtgactcgtttaatatgaccagg
ttgaatagaaccacagaatccattcctgatgataatgatttgctgtcctctatcttagtt
ggaagaaaatcattagttttgaagatgaagcccactccacctgtacctgaaacaatttca
acgaaacgccttcggtctgctcgccgggctagtgcctcgaagagaaaagtgcttatggat
gatatgatggttctacatggcgatatgatacgccaacaattgacaaatacagaaggcata
cgtcgcctgcgtaagaaagctccctgtactagccaagaaatctcaatgattcaaagacaa
ttcttggaggcagaaatttttaatcaacccagttttactggtatgtccacagcactgata
tttttgcaccatgagaaatttgatttgagtaggataagggtttgtgaaaatgatcaaagc
agtgatcctgttgaattgacgaagaatgtagagtcttctgtttttgtcagaagtgatttg
gaaacacaatttgttaacattcccattcaaagtgagattcagcacgctgaaaacattgac
ttcagatctcaacatgaaaacttgggtgtggtagctgaaatggaaattgatgtacaaaat
attgaagtggctgatgcagcaaatcattctgttaatgggcttgagtcgtcaattcagatt
gaacctgattccaatgatattgccaacaagatgacagaaaacattgtgcaaggagatctt
gtggataagagtaatggtgtagatgcttctgcaccaatggatacatcatgcatgtctcca
cagaagtttgaaactgagcctattgaggaaacatcactagcagacacaagtaatgggaga
gttgatgctattgaagatattggacatggtgttgaatttagtgtagatcctgagaaagat
aatttcaatttacatgcctccctcgtggaaactgaggggtatgatattatgctttctggg
cctggagatcaagctgtagaagtacatgaaaacaacgatttcagcattatgaatccggat
gaggtccaggcaccagaagaagtacgtgaagacaaggatttggcttttagctgtatgcaa
gctgatggagctaacttagattctagtcttcccttagaactgaatgtggatgtagaaaat
gctcccttgaatgaaggagaaaatgcagacgtcaaggaaattgatgtaaatgaaggaata
acggctgacagttctgcaatggagcttcgtgctgattatgaagatgatgtcacagttgga
aatgacacagaatttttgaatgtagatgatgacgacgtagaagaagactatgaagatgat
gatgatatgccaggtgctgaagatactcgtattcttgaaaacactggatggtcttctcga
accagggctgttgccaagtatctccaaaccttatttgacaaggaatctgtgcatggaaag
agggttctcccaatggacaatctattgacggggaaaactcgcaaggaagcatcaaggatg
tttttcgagacactggttctaaagacaaaggattacatcaatgtagaacaggaaatgccc
tttgacaacatcaatgtaaagccgagaataaagctcatgaaatccgacttctga
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