Humulus lupulus (common hop): 133816878
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Entry
133816878 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133816878 isoform X1
KO
K23288
syndetin
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hlp04131
]
133816878
Membrane trafficking [BR:
hlp04131
]
Protein recycling
Others
EARP complex
133816878
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
133816878
NCBI-ProteinID:
XP_062105183
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Position
2:complement(2551197..2563830)
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AA seq
1124 aa
AA seq
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MQPNLFPFGSVLGNPFLFNGDLSEGFESSRVFFLVPFLLSQGGGMDLSKVGEKLLSSVRS
ARSLGLLPSTSDRPEVPQRAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRRQSQV
VAELEEDFYEEEFDPIRHILENVPSEENELEYFEKQATLRLAQLDRVSERLSRQVMEHHE
VMVKGMNLVREVEKDLKVANVICMNGRRHLNSSVNEVSRDLIVNSHSKKKQAFLDIVPVL
TELRHALDMQAALESLVEEGNYCKAFQVLSEYLQLLDSFSELSAVQEMSRGVEGWLGRTL
QNLDSLLLGVCQEFNEQSYITVIDAYALIGDISGLAEKIQSFFLQEVLSETHSVLKDTVQ
EDHEVHKQNNRLTYSDLCLRIPESKFRQSLLRTLAVLFRLMCSYNEIMGFQLENKDTASQ
TSNSVPRDNDNSRNAGELQKMESASGNSSKFNGSLDQSVDRVSGSSSAVEATGVKSLSED
AQSTSSMHTSSNDSVYEATKDDGAASTSGSPWYYLRKDATGFVSQTLQRGRKNLWQLTTS
RISVLLSSSAVSSASIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKIVCDNYFIAFH
RQNIHALKMVLERENWLVMPPDTVQAISFAGLVGDGAPLLATSDGNSSHSRVIFDKSVKS
VDTGSNKSGFSHWAINGNPFFTKLVHTSKEGHSNQFNGAACSELGGHVNDSLYDEKISPR
KSDSSQLNGTNSILEEENEDLLADFIDEDSQLPSRISKPKVRRSHSSLKDDECVAQTGSS
ICVLRSMDKYARLMQKLKIINVEFFKGICQLFELFFHFVFETFGQQSNNSGGKGSVDFIS
SRLKMALSRITQDCDQWIKPSSSTQTSLTTSFAHADVTPSHPNSNFGHAPGISFGLKERC
AGADTISLIARMLHRSKTHLQSMFLQSNTAVVEDFYTNLVDAVPDLIEHIHKTTARLLLH
INGYVDRISNAKWEVKELGLEHNGYVDLLLGEFKHYKTRLTHGGIRKELQDLLSEYGIEI
IAETLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVPVNVKPKFHIVETFIKAYYLPE
TEYVHWSRAHPEYTKNQIIGLVNLVATMKGWKRKTRLEILERIE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaatttgttcccgttcggtagtgttttgggtaatccctttttgttcaatggc
gatttgagtgagggctttgagagctctagggttttctttttggttccgtttctgttgtcg
caaggcggtggaatggatttatctaaggttggggagaagcttttgagctccgttaggtct
gctagatcgcttggtcttcttccttctacttctgatcgccctgaggttccacaacgagct
gcggctgctgcagctgttgctcgtgcccttgcaggtctgcccccacatcaaagatatagc
ctgtcatcaagctctgaagaactaagctctatatatggcagcagacgtcagagtcaagta
gtggcagaactagaagaagacttctatgaagaggagtttgatcccataagacatattcta
gagaatgttccgtctgaagaaaatgagctagagtactttgagaaacaggctactctaaga
ttagcacaactggatagagtatcagagcggttgtctcgacaagttatggagcatcatgaa
gtaatggtgaagggtatgaatttggttagggaagtggagaaagacttaaaggttgcgaat
gtcatctgcatgaatggaagaagacatcttaactcatctgtcaatgaggtttcaagagat
ctcattgtaaattcccattccaaaaagaagcaagcgtttctggacatagttcctgttcta
actgagcttcgccatgcattggacatgcaagcagcacttgaatcacttgttgaggaagga
aattactgcaaggcttttcaggttctatcggagtatttgcaactcttagatagtttctct
gagctttcagcagtacaagagatgagccgtggagtagagggttggctggggagaactctt
caaaacttggattcacttttgttaggagtgtgccaggagtttaatgaacagagctatatt
actgtgattgatgcttatgctcttattggtgatatctctggtcttgctgagaagatacag
agcttctttttgcaggaagttctttcagaaacccactctgtattgaaggatactgtgcag
gaggatcatgaagtacataaacaaaataatagactcacatatagtgatctttgccttcgg
atacctgaatctaagtttaggcagagtttgttgagaacgctagctgtccttttcaggctg
atgtgctcctacaatgaaattatgggttttcagctggagaataaggatacagccagtcaa
acttcaaatagtgtgccaagggataatgataattctaggaatgcaggagagctccagaaa
atggagtcagcttctggaaattcctctaaatttaatggctctcttgatcaatctgtagat
agagtttctggttcatcttctgcagtagaagctacaggagtcaaatctttatctgaggat
gctcagtctacaagttccatgcatacaagttcaaatgactcagtttatgaagctacaaag
gatgatggggcagcatcaaccagtggatctccgtggtattatctccgaaaagatgctaca
gggtttgtttcacaaacccttcaaagaggacgcaagaatctttggcaactcacaactagt
cgaatatctgtcctgctttcttcttctgctgtttcttctgctagtattcaccaattcttg
aaaaattatgaagatctcaatgtcttcatcttggctggggaagcattttgtggagttgaa
gcagttgagtttagacaaaagctgaaaattgtgtgtgataattatttcatagcatttcac
cggcagaatatacatgcacttaaaatggttttggagagagaaaattggcttgtaatgcca
ccagatacagtgcaggcaatcagctttgctgggcttgttggtgacggagcacctctactt
gctacgtctgatggcaactccagtcattccagagttatttttgacaagtctgtgaaatca
gtagatactgggtcgaataagagcggattttctcactgggcaataaatggaaatccattt
tttactaaactagtgcatacttccaaagaaggtcattccaaccaatttaatggagcagcc
tgtagtgaacttggtggacatgtaaatgatagtctttatgatgagaagatatctccacga
aagagtgactcaagtcaattgaatggtactaattctattttagaagaagaaaatgaagat
cttcttgcagactttatcgatgaggatagtcaactcccaagtagaatttctaagcctaaa
gttcgaagaagtcattcaagtttgaaggatgatgagtgtgtagcccaaacaggatcatct
atttgtgttcttcgatccatggataagtatgcaaggcttatgcagaagttaaaaataatc
aatgttgagttcttcaaggggatatgccagttgttcgagttattttttcattttgtattt
gaaacatttggtcaacagagcaataattcaggtggaaaaggttcggttgacttcattagc
agtcgactaaagatggcattatctagaataacacaggattgtgaccagtggataaaaccg
tcatcctctacacaaacatctctgactacatcatttgcacatgcggatgtcacaccaagt
cacccaaattcaaatttcggtcatgcaccaggaatatcttttggtctcaaggaaagatgt
gcaggtgctgacaccatatctcttattgctcgaatgttgcatagatctaaaacccatctc
cagtcgatgtttcttcaaagtaatactgctgttgttgaagatttctacacaaatttggtg
gatgctgtacctgatcttatagagcacatccacaagacaactgcaagactattgcttcat
attaatggatatgtcgatcggatttctaatgcaaagtgggaagtaaaagagcttgggctt
gagcataatgggtatgttgatttgttgttgggagagtttaagcactataagactaggctc
actcatggtggaattcgcaaggagcttcaagacctcctttcagaatatggaattgaaata
atcgctgaaacactagttgaaggtctatcacgcgtgaagagatgtactgatgaaggacgg
gctctaatgtcattggatcttcaggtcttgatcaacggactgcaacatattgtcccggta
aatgtgaagcccaagttccatatagtcgaaacctttattaaggcgtactaccttcccgaa
actgaatatgtgcactggtcacgagcccacccggaatacacaaaaaaccaaattatagga
ctggtcaaccttgttgccacaatgaaaggttggaagagaaaaaccaggttggaaatatta
gaaaggatcgagtga
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