KEGG   Humulus lupulus (common hop): 133816926
Entry
133816926         CDS       T11341                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
hlp  Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlp03400]
    133816926
DNA repair and recombination proteins [BR:hlp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    133816926
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 zf-RING_5 ResIII RING_XB3-XBAT31 zf-RING_4 zf-ANAPC11 UBA_Rad5
Other DBs
NCBI-GeneID: 133816926
NCBI-ProteinID: XP_062105252
LinkDB
Position
2:3862349..3869502
AA seq 1038 aa
MGNKVTDELVSTVRSIVGSDYSDMDVIRALHMGNNDLTAAINIIFDTPNFKSKGNLGLQR
IPEVSNQNSRSEIPPVAVSSVNSKENGGGNENCSLRTDGNGADCPTESDVEEPAQGVCPP
ESSVDDKWWLVGCGEVAGLSTCKGRRIKPGDEVDFTFPLKGFSSTPSPGKAFGRGRNAAG
ACSEIVRFSTKDSGEIGRIPNEWARCLFPLVRDKKVRVQGSCKYTPEVLSIMDTINLSIS
VYINSSMFHKQHDTSLKAVSSSTEESVVHPLPTLFHLLGLAPFKKAKFTPDDLYSRKRPL
DLKASTLLTRKLRNPSANENEGEDEEPISDADLENIVGVGNSSELEEMDPPGTLQCELRP
YQKQALYWMTQLERLEKGRCTDGAGTTLHPCWEAYHLADKRGHVLYLNAFSGDATTQFPS
TLQMARGGILADAMGLGKTIMTISLLLSHSERNRPFVSQPSGEGSEACNISNSPNLPKRA
AKFPGFDKLMKQKGTLMDGGSLIVCPMTLLGQWKAEIESHVKPGSLTVYVHYGQSRPKDA
TFLTQSDVVITTYGVLASEFSTENTEESGGLYSIRWFRVVLDEAHTIKSSKSQISIATAA
LVADCRWCLTGTPIQNKLEDLYSLLRFLRVEPWGNWAWWNKLIQKPFEEGDERGLKLVQS
ILKRIMLRRTKFSTDRNGRLILVLPPADIQVIYCELTEAEKDFYEALFKRSKVKFDQFVE
QGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLSKLAKRFLKGSKNSVEGEDK
DVPSKAYVQEVLEELRNGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNAASGLCP
VCRKTVSRQDLITAPTENRFKVDIDKNWVESTKVAVLLRELEALRLSGSKSIVFSQWTAF
LDLLQIPLSRSNIPFLRLDGTLNQQQREKVLKQFSEDSNIVVLLMSLKAGGVGINLTAAS
SAFVLDPWWNPAVEEQAVMRIHRIGQTKKVTIKRFIVKGTVEERMEAVQARKQRMISGAL
TDQEVRSARLEELKMLFS
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgggcaacaaggttaccgatgagctcgtatccaccgtccgatcaatcgtgggctccgat
tactccgacatggacgtaatcagagccctccacatgggcaacaacgacctcacggcggcc
atcaacattatcttcgacaccccaaattttaaatccaaaggaaatttagggcttcagagg
atccctgaagtttccaatcaaaattcgagatcagaaattccacctgttgctgttagtagt
gtgaattcgaaggaaaatggtggcgggaacgagaattgctctttgaggactgacggcaat
ggtgcggactgtccgactgagtccgacgtggaggaaccagcccaaggtgtatgcccgcct
gagagttcggttgatgacaaatggtggctcgtgggttgtggcgaagtggcggggttgtct
acctgcaaaggaaggagaataaagcctggtgatgaagtggatttcacatttccgttgaag
ggcttctctagtacgccgtcgccgggcaaggcttttggtaggggtcggaatgcagccggg
gcttgttcagagattgtgaggttttcaactaaggattcaggagagattggtagaatacct
aatgaatgggctcggtgtcttttcccacttgtgagggataagaaggttagagttcagggt
tcttgtaaatacacacctgaagtgttaagtattatggacaccataaatttgtcaataagc
gtgtacatcaatagttccatgttccataagcaacacgatacttcacttaaggcagtcagc
agttccactgaggaatcagtggttcatcctcttcctacattatttcatttgctaggtcta
gctccatttaagaaggcaaaattcacccctgatgacttatactcaaggaagcgcccatta
gatttgaaggcctcaactttacttacacgcaagttaaggaatccttctgcaaatgaaaat
gaaggcgaagatgaggaacctatttcagatgctgatctggagaatattgttggtgttgga
aacagttcggagttagaggaaatggatccccctggtacacttcagtgtgagcttcggcct
taccaaaaacaggctctttattggatgacccaattagaaaggttagaaaagggacgatgt
acggatggagcaggaacaactcttcatccttgttgggaagcatatcatcttgcagacaag
agaggacatgttctttatttgaatgcattttctggtgatgctactacacaatttccaagc
actctacaaatggctagaggaggaattttggcagatgctatgggcttgggaaagactatt
atgaccataagtctcctcctttctcactcagaaagaaacagaccatttgttagccaacct
tctggtgaaggtagtgaggcgtgcaatatttcgaactcaccaaacctcccgaagagggca
gcaaaatttccaggttttgataagttgatgaagcaaaagggcacacttatggatggtggg
agtttgattgtatgtcctatgactctgttagggcagtggaaggcagagatagaaagtcac
gtaaaacctggatctttaaccgtttatgttcattatggacaaagtagaccaaaggatgca
acattcttaactcaaagtgatgtcgtgatcacaacatatggagttttagcatcagaattt
tccacagagaatactgaggaaagtggggggctttattcaattcggtggtttagagtggtt
cttgatgaggcgcatacaataaaatcctccaagagtcaaatttctatcgctactgctgct
ttagttgctgattgtcgctggtgtcttactggcacccctatccagaacaaactagaggat
ctgtacagtcttcttcggttcttgagggtggaaccatggggtaactgggcatggtggaat
aaactcattcaaaaaccttttgaagaaggggatgaaagagggttgaaattggttcaatca
attttaaagcgaatcatgttacggagaacaaagtttagcacagatcgcaatggcagactg
attttagtcctacctccagctgatattcaggtgatttactgtgaactcacagaagctgaa
aaagatttctacgaggccctttttaaaagatccaaggtgaagtttgatcagtttgttgag
caaggacgtgtacttcataactatgcttccatattggagttacttttacgtcttcgccaa
tgttgtgatcatccctttcttgtgatgagtcgaggtgatacacaagaattttctgatttg
agcaagctggccaaacggtttcttaaaggaagtaagaattctgtggaaggagaagacaaa
gatgtgccttccaaggcttatgtacaagaggttttggaagagttgcgtaacggggaacag
ggagagtgtccaatttgtcttgaagcatttgaagatgcagttttgacaccttgtgctcat
cgcctatgtcgtgaatgtttgttggcaagttggcgaaatgctgcttctgggttatgtcct
gtttgtaggaagactgttagtagacaagatcttattaccgccccaactgaaaatcggttc
aaggttgatattgataaaaactgggtggaatcaacaaaagttgctgttctgttgcgtgag
cttgaggctcttcgtttgtcaggctccaagagcattgtttttagccaatggactgctttt
ctggatttgttacagattcctctatctcggagtaacattccatttcttcgactggatggg
actctgaatcaacagcaacgtgaaaaagttctaaagcagttttcggaagatagcaacatc
gtggtgttgctgatgtcgcttaaggctgggggagttggaataaatctaacagcagcttct
agtgcatttgtcttggatccatggtggaatccagccgtggaggagcaagcagtcatgcgt
attcatcgaatcggccaaacaaaaaaggtgacgatcaaaaggttcattgtgaagggtacg
gtagaggaaagaatggaagcagttcaagcacgtaaacagagaatgatttctggtgcgttg
accgatcaagaagttcgtagtgctcgactagaggaactaaagatgcttttttcttag

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