Humulus lupulus (common hop): 133817083
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Entry
133817083 CDS
T11341
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133817083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlp03021
]
133817083
03036 Chromosome and associated proteins [BR:
hlp03036
]
133817083
Transcription machinery [BR:
hlp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133817083
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133817083
PBAF complex
133817083
GBAF(ncBAF) complex
133817083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
133817083
NCBI-ProteinID:
XP_062105456
LinkDB
All DBs
Position
2:complement(6734536..6737619)
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AA seq
545 aa
AA seq
DB search
MSMNNNNPPKNLGPSSSPFGNAGMVPPSMGPNPNFPQSQGQAQIPAGFQGQYQLSQSQAQ
AIAHAQSKAQAHAQAQVQAAHAQFQAQLQAQGLSLNQNQGIVNMGSASPNLSTPGSLGMK
RIPQKPPVRPPGFSPPNMMSPMRTMELTPAARRKKQKLPEKQLQDKVAAILPESALYTQL
LEFESRVDAALTRKKVDIQEALKTPPCIQKTLRIYVFNTFANQIRTIPKKPNAEPPTWSL
KIVGRLLEDGIDPDQPGAVQKTNPMYPKFSAFFKRVTISLDQRLYPDNHIIVWENARAPA
PHEGFEVKRKGDKEFSANIRLEMNYIPEKFKLSQPLMEVLGIEVDTRPRIIAAIWQYVKA
RKLQNPHDPSFFNCDPPLQKVFGEEKMKFTMVSQKVSQHLFPPQPIHLEHKIKLSGNSPV
GSACYDVLVDVPFPIQRELSALLANSEKSKEIDACDEAICGAIRKILEHRRRRAFFLGFS
QSPVEFINALIESQSKDLKYVAGEGSRSAEKERRSDFFNQPWVEDAVIRYLNRKPITGSD
VPGSA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaacaataataacccaccaaagaaccttgggccctcttcgtcgccctttggt
aatgctggtatggttcctccatccatgggaccaaatcccaactttcctcaatcacaaggt
caagctcaaatcccagctggctttcaaggacagtatcagttatcccaatcccaagcacag
gctatagcccacgcacagtcaaaagctcaggcccatgcccaagctcaggttcaagcagct
catgctcagttccaagctcagttgcaagcgcaggggctctcccttaaccaaaaccaaggc
attgtgaacatgggctctgcttcgcctaacctttcgactcctggtagtttaggtatgaaa
agaattcctcagaaacctcctgtacgccctcctggtttttcccctccaaacatgatgtcg
cctatgagaacaatggaactcacaccagcagctcgtagaaagaagcagaagcttcctgag
aagcagttacaagacaaagtggcggccattctgcctgaatctgctctatatactcagctt
cttgagtttgagagtcgcgttgatgctgctctcaccagaaagaaagttgacatccaagag
gctctcaaaaccccgccttgcattcagaaaacccttcgaatttacgtgttcaacactttt
gcgaatcagatccgtacgataccaaaaaagcctaatgcggagcctcctacatggtctctt
aagatagttgggcggctcttggaagatggaatagatcctgatcagcctggtgctgttcag
aaaacaaaccccatgtacccaaagttctcagctttcttcaaaagagtaaccatttcgctt
gaccagagactttaccctgataatcacattattgtatgggaaaatgctcgagccccggct
cctcatgaaggatttgaggtgaagagaaagggagataaagaatttagtgcgaacatacgg
ttggaaatgaactacattcctgagaagttcaagctatcacaaccattaatggaagttctt
ggtattgaggttgatacccgtccaagaataattgctgctatttggcagtatgtgaaggct
aggaagttgcagaacccacacgacccttcgtttttcaattgcgatccgccccttcagaaa
gtttttggggaagagaagatgaaattcaccatggtttctcaaaaggtctctcagcatttg
ttccctccacaacctattcatttggagcataagatcaaactttcaggaaatagtccagtg
ggaagtgcttgttatgatgtgttggttgatgtacctttcccaattcagagagaattgtct
gctcttttggccaactcagaaaagagcaaggaaatcgatgcatgtgatgaagctatatgt
ggagctataagaaaaatcctagagcaccgccggaggcgggccttcttccttgggtttagt
cagtcaccagtggaatttatcaatgctttgattgaatcccaaagcaaggatctgaagtat
gtagctggagaaggaagtcgcagtgctgaaaaggagcgtcggtcagatttcttcaaccag
ccatgggttgaagatgctgttatccgttacttgaatcgcaagccaattactggaagtgat
gttcctggaagcgcttga
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