Humulus lupulus (common hop): 133817973
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Entry
133817973 CDS
T11341
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133817973
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133817973
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Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_1st
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
133817973
NCBI-ProteinID:
XP_062106628
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Position
2:complement(66849618..66858290)
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AA seq
548 aa
AA seq
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MAGQRNSYGKRSHSDYSDNGGNKRRNSGEDREQFVIDSEDTVYRYLCPVKKIGSIIGRGG
EIVKQLRLDTKSKIRIGETVPGCEERVVTIYSTSDESNSFEDNGSNICPAQDALFRVHER
VVAEELHGDDDMEGGHQVTCRLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP
PCALNSDELVQISGDSLVVKKALYQIASRLHDNPSRSQHLLTSAVPNVYPSGGSLMGPNA
GAPLVGIAPLMGPYGGYKGDAGDWSRSLYSAPRDEASSKEFSIRLVCPTGNIGGVIGKGG
TIINQIRQESGAAVKVDSSATEGDDCLITVSAKEFFEDSYSPTIEAAVRLQPRCSEKVER
DSGIVSFTTRLLVPTSRIGCLIGKGGAIVTEMRRATKANIRILSKDNLPKIASDDDEMVQ
IAGDLDVAKEALIHVITRLRANLFDREGAVSTFLPVLPYIPVSADGSDGLNYESRDSKRH
GRGHSYSGGYGGSSDLASSDGYGSYGGSQIGGGGGGAYGAYGTYSSGRPGSSGLSSQNPV
SRRRNYGY
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccggtcagaggaatagttatggaaagcgttctcattctgattattctgacaatggt
ggaaataaaaggagaaattctggtgaagacagagaacagtttgtcatcgattcagaagat
actgtttaccgttatttgtgtcctgttaagaagataggaagcataatagggcgaggaggg
gagattgtgaagcagctgaggttggacacaaaatcaaagattaggattggagagactgta
cctggatgtgaagagcgtgtcgttactatttatagtaccagtgatgagagcaattctttt
gaagacaatggtagtaatatttgtcctgctcaagatgctctcttcagggttcatgaaagg
gttgttgctgaagaactgcatggtgatgatgacatggaaggaggtcatcaggttacttgt
cgtcttcttgtaccgtctgaccagattggttgcgttattggaaagggagggcagatagta
cagaacattcgtagtgagactggagctcagattcgtattctcaaggatgaacatctgcct
ccttgtgccttgaactctgatgagcttgtacagatatctggtgattctcttgttgttaaa
aaagctctctatcaaattgcttctcgcctccatgataacccatccagatcccagcatttg
cttacatctgctgtgcctaatgtatatccttctggtggttcacttatgggtccaaatgcg
ggtgctccccttgtgggaatagctccattaatgggtccctatggaggatacaaaggtgat
gctggagactggtcacgttctttgtactcagctccgagggatgaagcatcttcaaaagag
ttttctatccgcttggtatgtccaactggaaatattggaggagtgattggaaagggtggc
actataattaatcagatcagacaagagtcgggagcagctgtcaaagttgatagttccgct
actgaaggcgatgattgtttaataacagtttcagcaaaggagttctttgaggattcatac
tctccaactatagaggcagcagtacgcctgcaaccaagatgcagtgagaaggttgagaga
gattcaggaattgtttcattcacaactcgtcttcttgttcctacatcaagaattggctgc
cttattggtaaagggggagccatcgtaactgaaatgaggagggctaccaaagctaatatt
cgtatactgtcaaaggataatcttccaaaaattgcgtctgatgatgatgagatggtgcag
attgctggtgaccttgacgtagctaaggaagctcttatacatgtaattacccgattgagg
gctaatctttttgatagagagggtgcagtgtctactttccttccagttctaccatatatt
cctgtgtcggcagatggttcagatggtctaaattatgaaagtagagacagtaaaagacat
ggacgtggtcattcttattctggtggttatggtggctcaagtgatttggcatcttctgat
ggctatggaagttatggtggttcccagattggtggcggtggtggaggcgcttatggtgct
tatggaacttattcctcagggcgacctggtagttctgggttatctagccagaaccctgtt
tctcgacggagaaactatggttactag
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