KEGG   Humulus lupulus (common hop): 133818112
Entry
133818112         CDS       T11341                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    133818112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlp03400]
    133818112
DNA repair and recombination proteins [BR:hlp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133818112
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2 EBNA2_Core
Other DBs
NCBI-GeneID: 133818112
NCBI-ProteinID: XP_062106803
LinkDB
Position
2:complement(81710330..81720131)
AA seq 1621 aa
MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRMRENAQAKLRKTAEKLLLNHLKAMKLK
EIAEDIKNQRQKNDAKGKKALTDQTNLVGSDFDKEDLSSINCNQEKLDEMLAASIMADDL
ANNSTKSTSSPCEEDGWDDEEMILPDMHGVDPAVLAALAPSLQLDVKQKQKQDNVDKGKK
IVPDKAEINVDRDDSCNQEKLDEMLAASLMEEESRSFYYKTSTSSAPYPVEEDGDMDEDE
NGDEEMILPAMDGEVDPSILAALPPSMQLDLLVQIRERLMAENRQKYQKVKKDPAKFSEL
QIEAYLKTVAFRREIDQVQKVASGRGVDGVQTSRIASEANREFIFSSSFTGDKQVLSARS
EKYGDKQQAEDPSSAMHAPASTSKSNTVNGTKPNNSRRVFEDNIETYHDERGRIRVSRVR
AMGIRMTRDLQRNLDLMKEIENERTNVECLINESNPAVLETSSGKKFPETSSDGAESVTL
EYTNEDSVVNNGASVEISFEDDGDIKYFEGDDEIFAHLVAENPLKLSSDNIMSSRNLSCG
SDSDCSWEEGTTEVKDKSFSDDDKLRTELPSKGNNNDDSEVEWEEGVCEFTEHTSSDSKK
VTSKGNLEEDAELQEAIRRSLEDLDGQKSYSAMPEDDKLEVPKGYSCEGNRIIDSENKVE
GPVFSGDDGRKQNRLPCEILDDVENLDDEGLASISKSSDSSGSPKISRILIGSPCEVRIS
SLEQPLQDANKSANLSKEAQAPFAESVAPLKAKEVNVAGEDLLCTSNKVEGFSSSFNKFA
KDGSHTSVLCDDSPGDWVEDQKIATEAKPSAPLVETTNKAVYSLKALTNDLACDIENEEN
LTAKKSPENCFQEIGHSLENSSLRDNDVFRVEVTEASLEEEIQVLAQERMALGDEQGKLE
RNAESVSSEMFTECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA
RSVYKNIFDDRKYVETYFMKDVEKELGLTREQLIRMALLLGSDYTEGVSGIGIVNAIEVV
HAFPEEDGLQKFRDWIESPDPTILGKFDNQTDSTARKRGSKMGDNVKSSKSKMEEASASH
ENISEAQEQKQSADHTQDIKKVFMDKHRKVSKNWHIPPIFPSEAVISAYICPQVDKSTEP
FTWGKPDHFVLRKLCWDKFCWGSQKADDLLLPVLKEYNKHETQLRLEAFYTFNERFAKIR
SKRIKKAVKGIAGKPSLEMMDDAVQEVSGTKKKRERPDGSGDNQSEKFPQETEQSVVRNQ
SNYRKKSIPKQSKKQKIPRDGLVSESPTLLDDREEISKKSRVSGSCRGRGRGRIAGRGKG
KGVSKTSSSSSDGENENDEDVEEIQVGTLKRPLEVRKSTRLRKPVNYTANDSDIDDLDKL
FDQGNEKYFDGKVSEQDLCENADSSLGQNEKDDVRNPSPRNGLDEDYLAGGGGFCPDNGK
NDQPSVSQLGDSHLEADACEDYKAGGGFCMEESETSPDDNSISGQVSAAVLDNSDLFHCS
GMERSDACISEQIFYQANSTVNDEESKSRGLLPEKDEDYTQTTPVGTLHAMPYLRKKRRK
S
NT seq 4866 nt   +upstreamnt  +downstreamnt
atgggagttcacggtctttgggaattactggcccccgtcggccgccgcgtctccgtcgaa
accctagccggaaagaagcttgccatcgatgccagtatatggatggtgcagttcatgaag
gcgatgagggacgagaagggagagatgatacggaacgcgcatttgcttggattctttcgc
aggatttgcaagcttttgtacctgcggaccaagcccgtctttgtcttcgatggtggaacc
ccggccctcaagcgccgaaccgtcattgctcgacgaagaatgcgtgagaatgctcaggcc
aagctccgaaaaactgctgagaaattgctgcttaaccatcttaaggcgatgaagctgaaa
gagatagcagaggacattaagaatcagaggcaaaaaaatgatgccaagggtaagaaggcc
ttgactgatcagactaacttggtgggcagtgattttgataaagaggatttgagctccatt
aattgcaatcaggaaaagctggatgaaatgctggctgcatctattatggcagacgattta
gctaacaactcgacaaagtctacttctagtccttgtgaggaagatggttgggatgatgaa
gaaatgatactgccagatatgcatggagttgatccagctgtattagctgctttagcaccg
tctctgcaacttgatgttaagcagaaacagaagcaggataatgttgataagggtaagaag
attgtaccagataaagcagagatcaatgtagatagggacgatagttgcaaccaggaaaag
ttggatgaaatgttggcagcatctcttatggaagaagaaagtagaagtttttattacaaa
acatcaacatcttctgctccttatcctgttgaggaggatggtgatatggatgaagatgag
aatggagatgaagagatgatactgccagcaatggatggtgaagttgatccttccatacta
gctgctttgcctccatcaatgcaacttgaccttcttgttcaaattagagaaaggttaatg
gccgaaaacaggcagaagtatcaaaaggtcaagaaggaccctgcaaagttttctgagtta
cagatagaagcatatcttaagaccgttgctttccgccgggagatagatcaagtgcagaag
gtcgcttctggaagaggagtagatggtgtacagacttcccgaatagcatccgaggctaac
agagaatttatcttctcatcatctttcactggtgataaacaggtgctgtctgcgagaagt
gagaaatatggagataagcaacaggcagaagatccttcaagtgccatgcatgctcctgcg
tctaccagcaagtcaaacactgtgaatggaacaaaacctaacaactctagaagggttttt
gaagacaatattgagacatatcatgatgagagagggcgaattcgtgtcagtagagtgaga
gctatgggtattcgcatgacccgtgatttacagaggaatttggacttgatgaaagagatt
gaaaatgagaggaccaatgttgagtgtctgataaatgaaagtaatcctgcagttctggaa
acttcttcaggtaaaaaatttccagaaacttcaagtgatggtgctgaatctgttacattg
gaatatacaaatgaagattctgtggttaataatggtgcttctgtggagatttcttttgaa
gatgatggtgacatcaagtattttgaaggtgatgatgagatatttgctcatttagtagct
gaaaatcctcttaaactatcttctgataatatcatgtcatcaaggaacctgtcttgtggt
tctgattcagactgttcctgggaggaaggtactactgaagtgaaagataagagtttctca
gatgatgataagctcagaactgaactcccttctaaaggcaataataatgatgatagtgaa
gtggaatgggaggaaggagtgtgtgaatttactgaacatacttcgtctgattcaaaaaag
gtaacttccaaaggtaatttggaagaagatgctgaattgcaggaggcaataaggagaagt
cttgaagatttagatggtcagaaatcttattctgcaatgcctgaagatgacaagctggaa
gttcccaaaggatattcttgtgaaggtaataggattattgactcagaaaataaggtagaa
gggccagttttttcaggggatgatggtagaaaacaaaacagattaccttgtgaaattttg
gatgatgttgaaaacctggatgacgagggtcttgcaagtatctcaaaatcctctgattcg
tctggtagtcctaaaatttcaaggatactgattgggtcaccatgtgaagttcgcatcagt
tctttggaacaaccactgcaagatgcaaataaaagtgctaatttgtccaaagaagcacaa
gcaccatttgcagaatctgttgctcctttaaaagcaaaagaggtcaatgtggctggggaa
gaccttctttgtacttctaataaggttgaggggttctcttcctcttttaataagtttgcg
aaagatggttctcacacatctgttttgtgtgatgacagtcctggtgattgggttgaagat
cagaaaattgctactgaagctaaaccatcagcccctttggtggagacaaccaacaaagct
gtctattcattgaaagcattgacgaatgatttggcatgtgatattgagaatgaagaaaat
ttaactgcaaagaaaagtccggaaaattgtttccaagaaattgggcatagcttggagaat
tcttcattaagggacaatgatgtttttcgggttgaagttacagaggctagtctagaggaa
gaaattcaagttttagcccaagaacgtatggctcttggagatgagcagggaaagctggaa
cgtaatgcagaatctgttagtagtgagatgttcacagaatgtcaggagctgctgcaaatg
tttggattaccatatatcatagcaccaatggaggccgaagctcagtgtgcttatatggag
ctagcaaaccttgttgatggtgttgtaactgatgactcagatgttttcttgtttggagca
cggagtgtttacaagaatatatttgatgatagaaaatatgttgagacatacttcatgaag
gacgttgagaaggagcttggtctaacaagagagcagttgattcgcatggcacttcttctt
ggtagtgattatactgaaggtgtcagtggtataggcattgttaatgctattgaggttgta
catgcgtttcctgaggaagatggcctccaaaaattccgggactggattgaatcaccagat
cctactatattagggaagtttgataaccaaacagactcaactgcaaggaaaagggggtca
aaaatgggtgataatgtgaaaagctccaaaagcaaaatggaagaagcatctgcatctcat
gaaaacatttctgaggctcaagaacagaagcagtctgctgatcatactcaggacataaag
aaagtctttatggataagcatagaaaagtgagcaaaaactggcatatacctccgattttt
cctagtgaagctgttatttctgcttacatttgtcctcaagtagataagtcaactgagcct
ttcacatggggaaagccagatcattttgttcttcgcaaattgtgttgggacaaattttgt
tggggtagccagaaggcagatgatttattactacccgttctgaaggagtacaataaacac
gagactcaactgcgtttggaagcattttacacattcaatgaaagatttgctaaaattcga
agcaagagaattaagaaggctgttaaaggaattgctggaaaaccatccttggagatgatg
gatgatgctgtacaagaagtttccggaactaaaaagaaaagagaaagacctgatggatct
ggggataaccaatcagagaaatttccacaggaaacagagcaaagtgttgtcaggaaccag
agcaactataggaagaaatcaattcccaagcaatcaaagaaacagaagattcccagggat
gggcttgtttctgagtcaccaacactattagatgacagagaggaaattagtaaaaaatca
cgtgtgagtggaagttgcagaggaagagggagaggcaggatagcgggaagagggaagggg
aaaggggtatctaaaaccagctccagctccagtgatggtgagaatgagaatgatgaggat
gtggaggaaattcaagttgggacattaaaaaggccactagaagtgcgaaagtcaacacga
ttgcggaagcctgtaaactacaccgcaaatgactcagacattgatgatctggacaaatta
tttgaccaggggaatgaaaaatattttgatggcaaggtatcggaacaagatttatgtgaa
aatgctgattctagtcttggtcaaaatgaaaaggatgatgtcagaaatccttctcctcga
aatggcttggatgaagactatcttgcaggaggtgggggtttctgtccagataatggcaaa
aatgaccaaccaagtgtgagccaacttggtgattctcatcttgaggctgatgcttgtgaa
gactacaaggccgggggagggttttgcatggaagaaagtgaaactagcccagatgacaac
agcatttctggccaagtttcggctgctgtcttggacaattctgatcttttccattgttct
ggaatggagaggtcagatgcatgtatttctgagcaaattttttatcaggcaaactccaca
gtgaatgatgaagagtcaaaatcacgtgggttgttgccagagaaggatgaagattatact
cagacaactcctgtgggaactctacatgccatgccttacctgagaaagaaacgaaggaag
agttga

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