Humulus lupulus (common hop): 133818182
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Entry
133818182 CDS
T11341
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133818182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133818182
03016 Transfer RNA biogenesis [BR:
hlp03016
]
133818182
Enzymes [BR:
hlp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
133818182
Messenger RNA biogenesis [BR:
hlp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
133818182
Transfer RNA biogenesis [BR:
hlp03016
]
Prokaryotic type
tRNA degradation factors
133818182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
S1_RRP5
CvfB_2nd
Motif
Other DBs
NCBI-GeneID:
133818182
NCBI-ProteinID:
XP_062106894
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All DBs
Position
2:88704228..88723972
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AA seq
995 aa
AA seq
DB search
MAFVATRTNPLLKTIPHFLTWRTFGFRTICSGRLGFASQSEQINTEPSVAGVKVLETFKE
EFEIGSRFFMLETGKIARFANGAVVLGMEETKVLSTVTSSKSDGVRDFLPLTVDYQEKQF
AQGVIPNTFMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQVMASVLSSDGKQDPDV
MAANATSAALMLSDIPWGGPIGMIRVGRIGGQFIVNPTMDELCLSDLNLVYACTKDNTLM
IDVQAREISEKDLEAGLRFAHLGAVKYLEPQIRLAAKAGKHKKEYKLSMLSDRTLERVRE
LAEAPIEAVFTDPSYGKFERGEALENITQDVKRVLEEECDEESLKGLSKTVDTVRKKIVR
RRIINDGRRVDGRHLDEVRPVYCEAGNLPQLHGSSLFNRGDTQVLCTVTLGAPADAQRLE
SVVGPSTKRFMLHYSFPPFCINEVGKRGGLNRREVGHGTLAEKALLAVLPPEEDFPYTVR
INSEVMASDGSTSMATVCGGSIALMDAGISLREHVAGVSVGLISEVDPSTGTIKDYRIVT
DILGLEDHLGDMDFKVAGTRKGVTAIQLDIKPAGIPLDIICESLEYALKGRIQILDHMER
EINAPRAQDKNSPQLATLKYGNDSLRRLVGPLGALKRKIEEETGGRIAVSDGTLTVVAKN
QSIMDKVLEKIDFILGREIEIGGNYNGVVTSIKEYGAFVEFNGGQQGLLHISELSHEPVT
RVSDIVSVGQKLTLRCIGQDVRGNIKLSLKALTQTGSVKNNVPETPVSSLKVNQTGSVKN
NVHEAPVSSSKEVPKYSALSEDMFNGPEKDDDSSDTSEEELVNKNEGSAADLSSLSIPQI
LIRSAIECDEEENYAGLKRNANSKSKSFGASEGDRRSKFLSQMKEERKSDSKSKSQDGDE
LKKTITSFFHNRNDTEAETEATVTARSLKLGMKVTAKVYQIRAHGLVLDLGGGLRGMYRF
ETNGRKDFEIGEELRVECSSFSTKGIPVLSLLDDE
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgtagcaacccgaaccaacccgctcctcaaaactatcccccatttcctcaca
tggagaacatttgggttccgtacaatttgcagcggccgcctaggcttcgcgtctcaatcg
gagcaaatcaacactgaaccctccgtcgccggagtcaaggttctcgagacatttaaagaa
gaattcgaaataggatcacgcttctttatgttagagacgggaaagattgctcgtttcgct
aatggtgccgtcgttttaggcatggaagagactaaagtcttatcaaccgtaacgtcctcc
aaaagtgatggcgttcgtgatttcttacctcttacggttgattatcaagagaaacaattc
gctcaaggtgtgattccgaacacattcatgcggagggagggtgctcctaaggaacgcgaa
ttgttatgtggtcgtctcattgatcgaccgatacgtcctctgtttccttcaggattttac
cacgaagttcaggttatggcaagtgtcctctcttctgatggaaagcaagatcctgatgtg
atggcggctaatgcaacatccgccgcccttatgttgtcagatattccttggggtggtccc
attgggatgattcgagtggggaggatcggcggacagtttattgttaacccaacaatggat
gagctttgcttaagtgatctcaacttagtttatgcctgtacaaaggacaacacattaatg
attgatgtgcaagctcgtgagatttctgagaaagatttagaagctgggttacgatttgct
caccttggggcagttaaatatcttgaaccacaaatcagactggctgctaaagcaggtaaa
cataagaaagaatataagttgtcaatgttgtcagatagaacactggagagagtccgtgag
ttggcagaagctcctatagaagctgtgtttacagatccttcatatggcaagtttgaacgt
ggagaggccttagaaaacattacacaagatgttaaaagagttcttgaagaagaatgtgat
gaagaaagtttaaaaggtttatcaaagacagtagacacagtaaggaagaagattgttcgc
agaaggatcattaacgatgggcgaagggttgatgggagacatcttgatgaggttaggccc
gtgtattgtgaagctggcaatttgccacagttgcatggatcatcacttttcaatcgtgga
gatactcaggttctttgcactgtcacacttggtgcacctgctgacgctcaacgcttggag
tctgttgttggtccttcaacgaagcgcttcatgcttcactatagttttccaccattctgc
atcaatgaagtcggtaaacgaggtggcttgaataggcgtgaagttgggcatggaactctt
gcggagaaagctttacttgctgtcttgcctcctgaagaagattttccatacactgttcgt
atcaattctgaagtcatggcatctgatggttcaacatcaatggccactgtttgtggaggc
agtattgctttgatggatgctggcatttcactgcgtgaacatgtggctggtgtctctgtg
ggccttattagtgaagttgatccatcaactggcacgataaaggattatcgtatagtgact
gacattctgggtctagaagatcacttaggggacatggacttcaaagttgctggcacccga
aaaggagttacagcaattcagttggatataaaacctgctggaattccattagatattatt
tgtgagagcttagagtatgctcttaaaggtcgtattcaaatccttgatcatatggagagg
gagatcaatgcaccacgtgcccaagataaaaattctcctcaattagctaccttgaagtat
ggcaatgactcacttcgtcgcttggttggacctcttggtgctttaaagagaaaaattgaa
gaggaaacaggtggacgcatcgctgtaagtgatggaacactcactgtcgtggctaagaat
caatccataatggataaagtactagaaaagattgactttatactcgggcgtgagattgaa
atcggcgggaattataatggtgtggtaacttcaatcaaggaatatggtgcatttgttgag
ttcaatggtggccaacaaggccttctgcacatctcagagctgtcacatgaaccagttacc
cgtgtttcggatattgtgtctgttggccaaaagcttacgttgaggtgcataggtcaggat
gttcgtggcaacatcaaattatcccttaaagctttaactcaaactggatctgttaaaaat
aatgttcctgaaacacctgtctcatccttgaaagtaaatcaaactggatctgttaaaaat
aatgttcatgaagcacccgtctcatcttcgaaagaagtgcctaaatattcagcattatct
gaggacatgtttaatggaccagagaaggatgatgactcttcagatacatcagaagaagag
ttggttaacaaaaatgaaggtagtgcggcagatctcagtagtttatccattccacaaatt
ctaattcgaagcgctattgagtgtgatgaggaagaaaactatgctggtttgaagagaaat
gctaatagcaaatctaaatcctttggtgcttctgaaggagataggaggtcaaaattttta
tcccaaatgaaagaagagagaaaatctgattctaagtctaaaagtcaggatggagatgaa
cttaagaagactattacgtccttttttcataataggaatgatacagaagctgaaactgag
gctaccgttactgcaagaagcctgaagttaggaatgaaagttactgcaaaggtgtatcag
attcgagctcatggattggtccttgatttaggtgggggacttcgtggaatgtatcgcttt
gagacaaatggtaggaaggactttgagattggtgaggagttaagagttgagtgttcaagt
ttttcaaccaaaggcattcctgttctgtctttgttagacgatgaatag
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