Humulus lupulus (common hop): 133818203
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Entry
133818203 CDS
T11341
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
KO
K14962
COMPASS component SWD2
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133818203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133818203
03036 Chromosome and associated proteins [BR:
hlp03036
]
133818203
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133818203
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
133818203
COMPASS/SET1 complex (yeast)
133818203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133818203
NCBI-ProteinID:
XP_062106926
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Position
2:complement(90592568..90596245)
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AA seq
335 aa
AA seq
DB search
MMKSLTELDDDIVRSMAIGAVFPDFGGKINCIDFHRKDDLLVTSSEDDSVRLYDILNAKL
LKTTYHKKHGADRICFTHHPSSVICSSRYNVNSNGESLRYLSMYDNRCLRYFKGHKERIV
SLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAYDQQGLVFAVAMEGGAI
KLFDSRSYDKGPFDTFLVGGDTAEVFDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCGY
SLEPSPNKDIEATFTPDGQYVVSGSGDGTLHAWSVNRKNEVANWNSHIGVASCIKWAPRR
VMFAAAASNVLTFWIPNNSNAETGPMDTETEHHPQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtcgctgacggagctagacgatgacatagtgcgtagcatggccattggagcc
gtcttcccagattttggtggaaagattaactgtatcgattttcatcgaaaagatgaccta
ctagtcacttctagtgaggatgattcggtgcgattatatgatattttaaatgccaagttg
ctcaagaccacatatcacaagaaacatggggctgatcgaatatgctttacccatcaccca
agttctgttatatgttcctcgagatataatgtgaattctaatggagaatccctccggtat
ctctcaatgtatgataatcgatgtcttcgctattttaaggggcacaaagagagaatcgta
tctctctgcatgtctccagttaatgacagtttcatgtccgggtcactggatcacagcgtc
agaatatgggatcttcgtgtaaatgcctgccagggaattctacgcttgcgtgggagacca
acagttgcatatgaccaacaaggccttgtgtttgccgtggcaatggaagggggtgctata
aaattgtttgattcacgttcttatgacaagggtccctttgatacctttctagttggtgga
gatacagctgaggtctttgatataaaatttagtaatgacggaaaatcaatgctcttgaca
accacaagcaacaacatctatgttcttgatgcttatggaggagagaagcgttgtgggtac
agtttggagccctctcctaataaagatatagaggcaacatttaccccggatggccaatat
gtggtgtcaggctcgggagatggaactttgcatgcatggagtgtcaacagaaaaaatgag
gtggcgaactggaacagtcacattggagtggcatcgtgcataaagtgggcgcctcgcagg
gtcatgttcgcggctgcagcatccaatgttctcacgttttggattccaaacaactctaat
gcagaaactggtccaatggacactgaaactgaacatcatcctcaatga
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