Humulus lupulus (common hop): 133818452
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Entry
133818452 CDS
T11341
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133818452
03036 Chromosome and associated proteins [BR:
hlp03036
]
133818452
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133818452
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133818452
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133818452
microRNA pathway
RISC loading complex
133818452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133818452
NCBI-ProteinID:
XP_062107323
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All DBs
Position
2:complement(123409461..123416649)
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AA seq
906 aa
AA seq
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MENMKGAKEEGGLPPLPPPPPVVPENVKPELAVTPKYSIMSRKGIGRAGRRTPLLANHFN
VSLKVPDAVFYQYSVSITSEDGKEVNLKGIGRKIIDRLYQTYSSEFSGKRFAYDGERSLY
TVGPLPQIKFEFTVVLEESFAKQENGSPGGRGSPNERGKRSKRSFHSKTFKVELSYAAKV
PLRSVALALKGADADNSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSQNFTDVGGGV
IGVRGFHASFRPTQNGLSLNMDVSTTMILRPGSVTDFLIANQGVQSIRQIDWGKAKRMLK
NLRIKTRHRNMEFKIIGVSDKPCRQLFFPMKVKNGDHSNGEQTEDISVYDYFTRHCGIEL
GDSAYLPCLIVGRPKKPNYLPLELCSLVSLQRYTKALSSGQRASLVEKSRQKPQEKMKIV
VDAVRNYRYDSDPLLADCGISIERQFSQVEGRILEPPKLKFGNDGGFAPSNGRWNFNNKT
VLRPISISRWVVVNFSARCDMSKISRDLISCGRKKGIQIDGPHTLIDEDHLSRRGSPVTR
VEKMFDLIRDKVPGPPEFILCLLSERKNSEIYGPWKKKCLSDFGIVTQCIAPFKVNDQYL
TNVLLKINTKLGGINSLLAIEEPSRVPVIKDNPTMILGMDVSHGSPGRSDLPSIAAVVSS
RSWPCISRYRASVKTQSPKVEMIDGLYKPLENGKDDGIIRELLMDFYQTSNGRKPNQIII
FRDGVSESQFNQVLNIELDQIIKAYQHLGEENIPKFTVIVAQKNHHTKLFQAGGANNNVP
PGTIVDTGIVHPRNYDFYLCSHAGMIGTSRPAHYHVLVDEIDFSPDDLQNLIHSLSYVYQ
RSTTAISIVAPICYAHLAAYQMGQFIKFEDLSDTSSGQKTVTSSGIIPVPDLPKLHDNVK
GSMFFC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatgaagggtgctaaggaagaaggtggactcccacctttacccccgcctcct
ccagtggtaccggaaaatgtgaagccggaacttgccgtcactccaaagtattctataatg
agcagaaaaggaattggacgtgctgggcgccgcacacctttactggcaaatcatttcaat
gtttcccttaaagtcccagatgcagtattttaccagtatagtgtatctattacttcagaa
gatggtaaagaagtcaaccttaaaggaattggaagaaaaattattgataggctgtaccaa
acttactcttcagaattttctggcaaaaggtttgcatatgatggagagagaagtctttac
acagtaggtcctctgccacaaatcaagtttgagttcactgttgtcctggaggagtcattt
gcaaagcaggaaaatgggagtcctggtggcagggggagtcccaatgaaagaggtaaacgg
tctaagcgttcatttcactcaaagactttcaaggtagagttaagttatgctgccaaagta
cctttgaggtcggttgctcttgctcttaaaggagctgatgcagataacagcactcaggat
gcattgagagtgcttgatatcatccttaggcagcaagctgctaacaggggatgccttttg
gtgaggcaatcattctttcatgatgactcacagaacttcactgatgtcggaggaggtgta
attggtgttcgagggtttcatgccagctttcgcccgactcagaatggcttgtctcttaat
atggatgtgtccacaaccatgattttgagacctggatctgttactgattttctgatagct
aatcagggcgtacaaagtattcgtcaaattgattgggggaaggctaagcgaatgcttaaa
aatctgaggattaaaacaagacaccgcaacatggagtttaaaatcataggtgtgagtgac
aagccatgccgtcagctatttttccccatgaaagtgaaaaatggtgatcattcaaatggg
gaacagactgaagatatatctgtttacgattattttacaagacattgtggtatagaactt
ggtgattctgcttacctgccatgccttattgttggcaggccaaaaaagcccaactatcta
cctcttgagttgtgttcacttgtttcgcttcaacggtatacaaaagcattatcctctgga
cagagggcatcgttggttgaaaaatctcgacaaaagcctcaggaaaagatgaagattgta
gttgatgcagtaagaaattaccgatatgatagtgacccgttgctggctgactgcggcatc
tctatagagaggcaattttctcaagttgaaggtcgcatccttgagcccccgaagttgaag
tttggtaatgatggtggctttgccccctctaatgggagatggaactttaacaataagacg
gttttgaggccaattagcattagccgttgggttgttgtcaacttctctgcacggtgtgat
atgagcaaaatttcaagggatcttattagctgtggaaggaagaaaggaattcaaattgat
gggccacatacattaattgatgaagatcatctatctcggagaggatcccctgttacaagg
gttgaaaagatgtttgatctgattagagataaggttccaggcccacctgagtttatcctt
tgcctcttgtcagagagaaaaaattctgagatctatgggccatggaagaaaaaatgccta
agtgactttggtattgtcacccagtgcattgctccatttaaggtcaatgatcagtaccta
accaatgttctcctgaaaatcaatacaaagcttggagggattaactctttgttggcaatt
gaagaaccttcacgagttcctgtcataaaagataatcccacaatgattttgggaatggat
gtctctcatgggtctcctggccgctcagatcttccttccatagctgcggttgttagttct
cgaagttggccatgtatttcaaggtatagagcatcagtaaaaacacagtcgcctaaagtc
gagatgatcgatggtctatacaagccgttggaaaatggaaaggatgatggaatcatcagg
gagctgcttatggacttctatcaaacaagcaatggacggaaacccaatcagataattatc
ttcagggatggagtgagtgaatcacaattcaatcaagtcttgaacattgagttggatcaa
atcataaaggcgtatcaacatctaggggaggaaaacattcccaagtttactgtgattgtg
gctcagaaaaatcatcacacaaagttatttcaagctggcggtgccaacaataatgtccca
ccagggactatcgtggacactggaattgtgcacccaaggaactatgatttctatctgtgc
tctcatgctgggatgattggaacttctaggccagcacactatcatgtcctagttgatgaa
attgatttctctcctgatgacttacaaaaccttatccattccttatcttacgtgtaccaa
aggagcacaactgcaatttcaattgttgctccaatatgttatgcccatcttgctgcatat
caaatgggtcagttcatcaagtttgaggatttatcagatacttcttcaggacagaaaact
gttacttcttcgggtattattcctgttccagatctccctaagttgcatgacaatgttaag
ggctctatgttcttttgctga
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