Humulus lupulus (common hop): 133818577
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Entry
133818577 CDS
T11341
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133818577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlp03400
]
133818577
DNA repair and recombination proteins [BR:
hlp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
133818577
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Gene cluster
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Other DBs
NCBI-GeneID:
133818577
NCBI-ProteinID:
XP_062107517
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Position
2:complement(140562451..140627575)
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AA seq
983 aa
AA seq
DB search
MRTRKKSSSGTDTSTRPIRDSESRSSLEILNDNGTLAEKSQDAVGRLLRRSNKRGSRGTK
KNDNNLQQCDLSSTQGSGSKKDGKQDIDSSVKSAVLEADGCCRDTSGNTEYKVDEESLQC
TLSENRAEIDDLDWEDGSIPTFDPASNHEVTIEFNETPDSVRRKPIHRVTAEDKEIAEIV
HKVHLLCLLGRGRLIDRACDDSLIQAALLSLLPKHLLNISTVAKLTAKDLHPLILWFRDN
FHVRSLTDVKISFHSALAFALETREGTSEEIAALSVALFRALNLTSRFVSILDVTSLKPD
GEKSDYFSHDSSRSCKGIFSNSTPMVARQSEVSASPGKSFSPSQSVYETSQRSSRRTKNC
YLTSNTQPQNFPTNYDLNNKHVSRDCSLACESKRDSSEACPAQKSQGSKRKGDLEFELQM
EMALSSTAVGAADTKIHSLTNNVDNNLSTFSSLSKRRKKIVCEESCSNVISTAIGSKRVG
SPLYWAEVHCNGENLTGKWVHVDAINAIIDGEQKVEAIAAACKTSLRYAVAFAGNGAKDV
TRRYCMQWYKIASKRVNSIWWDAVLAPLRDIESRATCGMVHLKNDHEDASFNPDNSVRIS
ENLNNENFPNNPVLLGKSGLEVSKDCGEKTGAESSLRNSVNASRSSLEDMELETRALTEP
LPTNQQAYKNHHLYAIEKWLNKYQVLHPKGPILGFCSGHPVYPRACVQTLKTKDRWLRDA
LQVKVKELPVKELKYSRKLQKVKSFEDDDCARDNSEGTLQLYGKWQLEPLQLPHAVNGLV
PKNERGQVEVWSEKCLPPGTVHLRLPRVFSIARELEIDYAPAMVGFEFRNGQSYPVFDGI
VVCAEFRDVMLEAYREEQGRKEAEEKKRNEREAISHWYQLLSSIVTRKRIKDRYGKSLSS
QASIDIQTTSNISNVHVSANQDVNHSVRCQQGDVDMKMSDTPSIDLPKEHQHVFLTEDQC
FDEENLVLIKRCHCGFSIEVEEL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccaggaagaaatcatcatcaggcacggacacttcaacaagacctatacgtgat
tctgaaagcagaagctctttagagattctcaatgacaatggaactcttgctgaaaaatca
caggacgctgttggcaggcttctgagacgttccaacaaacgaggctccaggggaacaaag
aaaaatgataataatctacagcaatgtgatttaagtagcacgcaaggaagtgggtccaaa
aaagatggcaagcaagatatagattcgagcgtcaaatcagctgttttggaggctgatggt
tgttgtagagatacatctggcaacacggaatataaagttgatgaggaaagtttacaatgc
actctttcagaaaacagggcagaaatagatgatttagattgggaagatggatcaattccg
acatttgatcctgcaagtaatcacgaagtgaccattgaatttaacgagacaccagattct
gtgaggcggaaacctattcacagagttactgcagaagataaggaaattgctgagattgtt
cataaggttcatttactttgcttacttggacggggaagattgattgaccgagcttgtgat
gattctcttattcaggccgctttactttctcttcttcctaagcacttgctgaatatatca
acggttgcaaaattaactgcaaaggatttgcatcctcttatcctttggtttcgagataat
tttcatgttagaagtttaactgatgtgaaaatctcatttcattcggctctggcatttgct
cttgaaactcgtgaagggacttcagaagagattgctgcgttgtcagtggcattgtttaga
gctttgaatcttacatccaggtttgtgtccattttggatgtcacctccttaaaaccagat
ggagaaaagtctgattattttagtcacgattcaagcagatcatgtaagggtatcttcagt
aattcaactccaatggttgctagacaaagtgaggtgtctgcatctcctggcaaatcattt
tcacccagtcagagcgtgtatgaaacttcacaaaggagttcacgcagaactaagaactgc
tacttaacaagcaacactcaaccccaaaactttcccactaattatgacttgaacaataaa
catgtgtcacgtgattgttcattagcttgtgagtcgaagcgtgattcttctgaggcatgt
cctgcccaaaaatctcaaggatcaaagagaaaaggggatcttgagtttgagttgcagatg
gaaatggctctttcttcaacagcagttggagctgcagatactaaaatacattcacttacg
aacaatgtagacaataatttgtctactttctcttcactttccaagagaaggaaaaaaatt
gtttgtgaagaatcatgttccaatgtaatatccactgcaattggatcgaaaagagtgggg
tctcctctgtattgggcagaagtacactgcaatggagagaacttgactggaaagtgggtg
catgttgatgctattaatgctattattgatggagagcagaaggttgaagctatagctgct
gcatgcaaaacatctttgagatatgcagttgcctttgcagggaatggtgctaaagatgtg
acacgaaggtattgtatgcagtggtacaagatagcatcaaaacgagtcaactcaatttgg
tgggatgcagtcttggcaccgctgagagatatcgagtcaagagcaacctgtggcatggtc
catttaaaaaatgaccacgaagatgcctcatttaatcctgataattcagtgagaatttca
gaaaatctgaacaatgaaaattttcccaacaatcctgtcttgcttgggaagtctggcctt
gaagtctcaaaagattgtggtgagaaaactggtgcggaatcttctttgagaaattctgtg
aatgcttcaagaagctctcttgaggacatggagttggaaaccagagctttgactgagcca
cttccgacaaatcaacaggcatataaaaatcaccacctatatgctattgaaaaatggctt
aacaagtatcaggtacttcatccaaagggtcccattcttggtttttgttctggtcatcca
gtctatcctcgagcatgtgttcaaacactcaaaacgaaagacagatggctgcgagacgca
ttgcaagttaaagtcaaagaactccctgtaaaggaattgaaatattctaggaagcttcaa
aaagtaaaatcttttgaagatgatgattgtgccagggataactctgaaggaacactccaa
ctgtatggaaaatggcaactggaaccattacagttgccacatgctgttaatggattagtg
ccaaagaatgaacgtggtcaagtggaggtgtggtctgagaagtgcctcccaccaggaact
gtgcatttaaggttgccaagagtattttccattgccagggagctggaaatcgattatgca
cctgcaatggttggctttgaattcagaaatggtcaatcttatcctgtctttgatggtatt
gtagtttgtgccgagttcagggatgtgatgctagaggcatacagggaagaacaaggaaga
aaagaggctgaagagaagaaaaggaatgaaagggaggcaatatctcactggtatcagctt
ctgtcatccattgttactcggaaaaggatcaaggaccgttatgggaaaagtttgtcgtca
caggcttccatagacatccaaaccacgagtaatatctcaaatgtgcatgtcagtgcaaat
caggatgttaaccactctgttagatgccagcaaggagacgtggacatgaaaatgtcagat
actccatccatcgatttgccaaaagaacaccaacatgtattcttgacagaagaccaatgt
tttgatgaggagaatttggtacttattaaaagatgccattgtggattttcaattgaagtg
gaggaattataa
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