Humulus lupulus (common hop): 133818684
Help
Entry
133818684 CDS
T11341
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133818684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133818684
Spliceosome [BR:
hlp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133818684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
133818684
NCBI-ProteinID:
XP_062107692
LinkDB
All DBs
Position
2:166997977..167009605
Genome browser
AA seq
481 aa
AA seq
DB search
MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVCVHVFYKPRLEFPYFFELLRLSV
SEAKVGFLYLRYAADPKTLWSWFEPYVKDEEEFSPGSSGRMTTMGAYVRDLLLGQYYFDT
LFPRIPVPVMRQVTANLDKMNLPSKHSGVTGDTTRHGSDDTARRPPSVKAALSVSFGQRA
PHRASTRDSSPVRRTLPPPPPYDRSTTEDVRSRRSQSREYSDREHRDRDNERDRNRDRDN
ERERNRDRDKERDRERDRDRERDRDRDRERYKERERDRIKERDRDRERDRDRDRVRVRDR
EREGDRESSYDYDRRSRYGEREGRRDYEKSDRDGSRHYRSRSRSRSRSRSRSHSLQTAAV
PYSSPQRDANKERTSASSNLAKLRNMYGDLGSQKGDGGTDRATGSSNGGEEVIRLGGSSW
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaaacttgtgggaaaccaatagactcattgctggagaaggtgctttgtatg
aacattctatcttctgattattttaaagagctttaccggttgaagacttaccatgaggtc
attgacgaaatctacaaccaagttgatcacgtcgagccttggatgaccggaaactgccgt
ggtccttccaccgccttttgccttctctacaagttcttcactatgaaactcactgtcaag
cagatgcacggtctcttgaagcacactgattccccctacatcagagcggtatgtgttcat
gtattttacaaaccaaggttggagtttccttatttctttgagttactgagactttcagtt
tcagaagctaaggttggattcctctatttgaggtatgctgcggatccaaagactctgtgg
agttggtttgaaccatatgtcaaagacgaagaggaattctctcctggatccagtggacga
atgactacaatgggtgcatatgtgcgcgatttgcttcttggacagtattacttcgatacc
ctctttccgcgaattcctgttcctgtaatgcgccaggttactgctaatcttgataagatg
aatcttccatccaagcattcgggtgtgacaggagataccacccggcatggatctgatgat
actgctcgacgtcctccatcagtgaaagctgctctttctgtctcttttggtcagcgtgct
cctcatcgtgcctcaactagggattcctcacctgttcgtcgcactcttccaccacctcct
ccttatgacagatccaccactgaggatgtacgaagccgacgcagccagagtcgtgaatat
tctgacagagagcatcgtgacagggataatgaaagggaccggaatagagacagggataat
gaaagggaacggaatagagacagagataaggaaagagaccgggagcgtgatcgtgatcgt
gaaagggacagagatagggaccgagaaaggtacaaggagagggagcgtgatcggatcaag
gagagagacagggacagagaaagagatagggacagagacagggtcagggtcagggacaga
gaaagagaaggggatagagaatccagctatgattatgatcgtaggtccagatatggagaa
agagaaggccgaagggactatgagaaaagtgaccgtgatggtagcagacattatcgcagt
agaagccggagccgcagtcgaagcaggagtagaagtcatagcttgcaaactgcagctgtg
ccttattcaagcccacagagagatgcgaacaaggaaaggacatcagcatctagcaaccta
gccaagcttaggaacatgtacggtgatttaggcagtcaaaaaggggatggtggtacggac
agggctactggaagcagcaatggtggtgaagaggttattagacttggtggttcttcttgg
aaatag
DBGET
integrated database retrieval system
