Humulus lupulus (common hop): 133818874
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Entry
133818874 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133818874
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133818874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133818874
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133818874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
133818874
NCBI-ProteinID:
XP_062107959
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All DBs
Position
2:200246315..200264734
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AA seq
315 aa
AA seq
DB search
MANLPQSLSLPFGGGSVPVGGGGELSREKKMASAEQLVLDLSNPDLRENALLELSKKREL
FQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRK
LFINAHIPLYLYPFLNTASKSRPFEYLRLTSLGVIGALVKVDETEVISFLLSTEIIPLCL
RTMEMGSELSKTVATFIVQKILLDDMGLDYICTTAERFFAVGRVLGSMVASLAEQPSSRL
LKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFSGCLREDPTTRRWLQQLLHNVGVSRV
PTLQAGTGFEHMMVN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttgccccaatcactatcacttccgtttggaggaggtagtgtgcctgtaggt
ggtggtggtgaacttagcagagaaaaaaaaatggcttccgcagaacagttggtacttgat
ctcagcaatcctgatctccgagagaacgctctcctcgaactctccaagaagagagaatta
tttcaagacttggctcctttactgtggaattcatttggtactattgccgcactgttacag
gagatcgtatctatataccctgttttatcaccgccaaatctgactcctgcacagtcaaac
cgagtttgcaatgcccttgcgcttcttcagtgtgtggcctctcacccagatacaaggaag
ttgttcatcaatgcacacattccattgtatctgtatcctttcctcaatacagcgagcaag
tcgagaccctttgagtacttgaggcttactagtctaggggtcattggggctttggtgaag
gttgatgaaacagaagttattagtttccttctctcaacagaaataattcccttgtgcctg
cgtactatggaaatgggcagtgagctatccaaaacggttgctacatttatagttcaaaag
attttgttggatgatatgggcttagattatatctgcactacagcggagaggttttttgca
gttggtcgtgttttggggagcatggtggcttcactagctgagcagccctcatcgcgttta
ctaaaacatatcatcagatgttatcttcgattgtcagacaatccaaaagcttgtgatgct
ttaagaagctgccttcctgacatgttaagagatgctaccttcagcggttgcctgcgtgaa
gacccaacaaccaggagatggctgcaacagttgctccacaatgttggtgttagccgtgtt
ccgacacttcaagccggaacagggtttgagcacatgatggtgaattga
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