KEGG   Humulus lupulus (common hop): 133819010
Entry
133819010         CDS       T11341                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
hlp  Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlp03400]
    133819010
DNA repair and recombination proteins [BR:hlp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    133819010
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 DEAD zf-RING_2 ResIII zf-RING_UBOX zf-C3HC4_2 Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 133819010
NCBI-ProteinID: XP_062108133
LinkDB
Position
2:225970894..225976871
AA seq 1188 aa
MVKPHLAPKMVPIYINPYTQDSFSYSLSLSRFSVLMSKTMETDNATVMAEENVKKVCSVT
GSGYDNGTAIKLLVDNPVPMTVSRTITGTGFRISTQNIEQDSKGSNIETDDQEKASKVAI
TPRMSFDDFLKSTNTQVMTTMEYLKSQVQESEVRVKEETDVGFEKQVVSQNEVKCSNDES
LNGKIKQGVLEVAVETVKRKTLVESLCEEQVRSNNQVMVKLDNPIKAQPITAIVPVKDEP
VIDAEPINWAKAIVPVKEEAVRETLRERFIKKFKSAPVRGPSWQKLPDAKKQKTENQKPC
PIPVEDGDFPEDPDWFLVGRTMVTALSTTKGRKLVDNEIVHFAFPSTDWKSNGRWIVRFS
TKRYGEIGRLPMEWGKCVVPLVNSGKVKFFGRCVAAPSNLSIMQDIILYVSFYIHRSMFI
EDDNSSRGWKLEAVNINSTIYPLLTLFKLLKIQPYQRAEFTPEELDSRKRLLNLESAPDE
TASMLPIVKRRQGCQQYPEQSKDEQAVSESSMNNIVGAAESYDLEEMEPPRNLTCSLRSY
QKQALYWMSELEKGIDVEEAAKTLHPCWAAYKISDERASSIYVNLFSGEATTKFPTATQM
ARGGILADAMGLGKTVMTIALILKSPGHGSSNNQGLLKGSQTDTSSKPNGGTLIVCPMAL
LSQWKDELETHSDADSISIFVHYGGGRSTSPKLIAEHDVVLTTYGVLSSAYKYDEENSIF
HSMDWYRVVLDEAHTIKSWKTQGALAAFTLSSHCRWCLTGTPIQNNLEDLFSLLCFLHVE
PWCNWAWWNKLIQRPYDNGDPRGLRLIKAILRPLMLRRTKESKDKKGRPILVLPPTDIQT
IECEQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVMSR
GDSQKFADLNKLAKRFLDSNSDSTSSASAPPSRAYVEEVVNGIRCGDNSECPICLESADD
AVLTPCAHRMCRECLLSSWRTPAAGLCPICRQILKKTDLITCPSESKFQVDIEKNWKESS
KVSSLLHCLERICSSGSGEKSIVFSQWTTFLDLLEIPLKKRRIGYLRYDGGLSQKQRERV
LNEFNDTKEKMVLLMSLRAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTV
SVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3567 nt   +upstreamnt  +downstreamnt
atggtaaaacctcatttggcgccaaaaatggtcccaatatatataaacccctacactcaa
gactcgttctcgtattccctctctttatcccgattctctgttctgatgagcaaaacaatg
gagactgataatgctacagtaatggcggaggagaatgtgaagaaggtttgctccgttact
gggtccgggtacgataatggtacggcgatcaaacttttagtcgataatcctgtcccgatg
accgttagccggacgattactggtacagggtttagaatttcgacccagaatatcgaacaa
gattctaagggttccaacattgagacggatgatcaggagaaggcgagtaaggttgctatt
actcctagaatgtcttttgatgattttttgaaatccacgaatactcaggttatgactact
atggagtatctcaaatcccaggtgcaagaatctgaagttcgggttaaggaggaaactgat
gttgggtttgagaaacaggtggtgtctcaaaatgaagtaaagtgttccaacgatgaaagt
ctcaatggtaaaatcaagcaaggagtgttagaagtagcagtagagacggtgaagcgcaag
actcttgtagagagtttgtgtgaggaacaggttcgaagtaacaatcaagtcatggtgaaa
ctagataaccccattaaagctcaaccaataacggctatagttccagtgaaagacgagcct
gtgatagatgctgagccgattaactgggcgaaggccattgttccggtgaaagaggaggcg
gtaagagaaacattacgcgagcgtttcatcaagaaattcaaaagtgcccccgttagagga
ccgagttggcagaagctgcctgatgcgaagaagcagaaaactgagaatcaaaagccttgt
cccattccagtggaggatggggacttccctgaagacccggactggtttttggtgggaaga
acaatggtgaccgcgctttcaacaactaaaggcaggaaattggtggacaatgagattgtc
catttcgcttttccttccactgactggaaatctaacggccgttggattgttcgcttttcg
accaaacgatatggagagattggtaggcttccaatggagtggggtaagtgtgttgttcct
cttgtaaattctggtaaggtgaagttttttgggcgttgtgtagctgcaccatcaaacctt
tctataatgcaagatattattttatatgtgagcttttacatccaccgctcgatgtttata
gaggatgataactcttcacgggggtggaagctagaagctgtgaacattaactctacaatc
taccccctcctcaccttgttcaagttgctgaaaatccaaccttatcagagggctgagttc
accccagaagaacttgattctcggaaacgccttttaaatctagaaagtgctccagatgaa
actgcatcaatgctgcctattgtaaaaagaagacaaggttgccagcagtatccagagcaa
agcaaggatgagcaagccgtttctgagtcatctatgaataatattgttggtgctgcagaa
tcatatgatttggaggagatggaaccccccaggaatctcacttgtagtctaaggtcatac
cagaaacaggccctctactggatgtcagaactagagaagggaattgatgttgaggaagca
gcgaagacccttcatccttgctgggcagcctataaaataagtgacgagagggcttcctca
atctatgtcaacctcttctcaggggaagcaacaaccaaatttccaactgccacgcagatg
gcaagagggggaattctagcagatgcgatgggacttggaaaaactgttatgacaattgct
ctaattcttaaaagtcctggtcatggtagttctaataatcaaggacttcttaaaggttct
cagacagatacctcatctaaaccaaacggcggcactcttattgtttgtccaatggctttg
ctaagtcagtggaaggatgagcttgaaactcattcggatgcagatagcatttccatattt
gttcactatggtgggggaaggtcaactagccccaagttgattgcagagcatgatgttgtc
ttgacaacatatggtgtcttgagttctgcttataaatatgacgaagagaacagcattttc
cacagcatggactggtatagggtggtgctagatgaagcccatacaattaagtcttggaag
acccaaggtgctcttgctgcttttactttgtcctcacattgcagatggtgtttgacagga
acacctattcagaataatctggaggacctcttcagcctcttatgcttcttgcatgttgaa
ccatggtgcaactgggcttggtggaacaaattgattcaaaggccttatgacaatggggat
cctcgaggccttagactaataaaggctattttgagaccgctaatgttgagaagaacaaag
gaatcaaaggacaaaaaaggaagacccatacttgttcttcctccaactgatattcaaacc
atcgaatgtgaacaatcagaagctgaacgtgacttctatgatgccctgttcaaaaggtca
aaggtccaatttgaccaatttgtggcacaagggaaagtcctacataattatgctaacatt
cttgaactactcttgcgtctgaggcagtgttgcaaccatccgtatcttgttatgagtcga
ggagattcacaaaagtttgcagatttaaataagcttgccaagagattccttgactcaaat
tctgactcaacatcttcagcttcagcaccaccctccagagcctatgttgaagaagttgtt
aatggcattcgatgtggtgataactctgagtgtcccatttgcctggagtctgcagatgat
gctgtcctaacaccctgcgcccataggatgtgcagagagtgtctcctttcaagctggcgg
acaccggctgctggcctctgccccatttgtaggcagatccttaaaaaaacagacctcata
acctgcccatcagagagcaagttccaagttgatattgagaagaactggaaagaatcatca
aaggtttctagtctcttgcattgcttggaaagaatctgctcctcgggctctggtgaaaag
agcattgttttcagtcagtggactacatttttggatcttctagagattcctttaaagaag
aggagaatagggtacttgaggtatgatggagggctgtctcagaagcaaagggaaagagtc
ttgaatgagttcaacgacaccaaagaaaaaatggtactactaatgtctttgagagctggt
ggtgttggcttgaatttaactgcagcatccaatgtgttcttaatggatccatggtggaat
ccagcagttgaagagcaagcaatcatgagaattcaccgcattggtcaaaaaagaacagtt
tctgtccgtagattcatcgtcaaggatactgttgaggaacgcatgcagcaagttcaggca
agaaaacagagaatgattgctggggcacttactgatgaagaggttcgttctgctagaatt
gaagagctcaaaatgcttttcagatga

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