Humulus lupulus (common hop): 133819366
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Entry
133819366 CDS
T11341
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133819366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlp03021
]
133819366
03036 Chromosome and associated proteins [BR:
hlp03036
]
133819366
Transcription machinery [BR:
hlp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
133819366
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
133819366
RSF complex
133819366
WICH complex
133819366
B-WICH complex
133819366
NORC complex
133819366
BRF complex
133819366
NuRF complex (fruit fly)
133819366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DBINO
DEAD
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
133819366
NCBI-ProteinID:
XP_062108575
LinkDB
All DBs
Position
2:266132480..266139897
Genome browser
AA seq
1075 aa
AA seq
DB search
MAKLSKPQLSSDEALSSNSSSEELNQSNGEEEDEEEIEAVARSAASDDDEPALANSPGSD
DDEAAAENGDDDEEEDGDNVANAEVSKREKARLKEMQKVKKQKVQEILDAQNAAIEADMN
NRGKGRLNYLLQQTELFAHFAKGDQSSSQKKTKGRGRHASKITEEEEDEECLKEEEDGLS
GTGTTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYL
HEFRGITGPHMVVAPKSTLGNWMNEIRRFCPTLRAVKFLGNPDERKHIREDLLVAGKFDV
CVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQN
NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK
GLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQ
GAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGY
LYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQ
VDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVN
KDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDD
TAELYDFDDEKDENKLDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQGGPTKPKEPR
IPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQIKDTIDVEEPEEVGDPLTAEELE
EKERLLEDGFSSWSRRDFNTFIRACEKYGRNDIKSIALEMEGKTEEEVERYAKAFKERYK
ELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECD
RFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEY
DERERQARKEKKLAKNMTPSKRALSRQATESSPSSLKKRKQLTMDDYVSSGKRRK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagctctcgaaaccgcagctttcttccgacgaagctctctcctccaattcgtcg
tcggaggagttaaaccagagcaacggcgaggaggaggatgaagaagaaattgaagcggtc
gcgcgctctgctgcctccgatgacgatgagcccgccttggctaactctcctggttccgac
gatgacgaggccgccgccgagaacggcgatgacgatgaggaagaggatggagacaatgta
gctaatgctgaagttagcaagcgtgagaaagccagactcaaagaaatgcagaaagtaaag
aaacaaaaagttcaggagatattggatgctcagaatgctgccattgaagctgacatgaac
aataggggcaaaggacgtttgaattatcttctgcaacaaacagagttatttgctcatttt
gctaaaggtgaccaatcttcgtctcaaaaaaagaccaagggaaggggtcgtcatgcatca
aaaataactgaagaggaagaggatgaagaatgcctcaaggaagaagaagatggtttatct
ggtacaggaactacaagacttttgacacagccttcttgtatccagggaaaaatgagagac
taccaacttgctggacttaactggctcatacgactctatgagaatggtataaatggaatc
ctggcagatgaaatgggtcttggtaaaacattgcagaccatttccttgatgggctatctg
catgagtttaggggaattactggccctcatatggtagttgctccaaaatctactcttgga
aattggatgaatgaaattcggcgtttttgcccaactttgcgggctgtgaagtttcttgga
aatcctgatgaaaggaaacatatacgagaggacttgctggttgctgggaagtttgatgta
tgtgtaacaagctttgaaatggctattaaggagaagactaccttacgtcggttcagttgg
cgctatataatcattgatgaagcccatcgaatcaagaatgaaaattctcttctttccaaa
acaatgaggctttataatacaaattatcgccttctaattacaggaacaccgcttcagaac
aaccttcatgaactctggtctctcttgaactttcttctgcctgagatttttagttcagct
gaaacatttgatgagtggttccagatttctggtgaaaatgaccaacaggaggttgttcaa
cagcttcacaaggttctccgaccatttcttcttcgaagactgaagtcagatgtagagaaa
ggcttaccccccaaaaaggaaactattcttaaagttggtatgtcacagatgcagaaacag
tactacagggctttgctgcagaaggatcttgaagttgttaatgctggtggagaacgtaag
cgacttttgaatatagcaatgcagctgcgtaaatgctgtaatcatccatatctttttcaa
ggtgctgaacctggtcctccatacacaacaggagatcatcttattacaaatgctggtaaa
atggttcttttggacaagttgcttccaaagctaaaagagcgtgattctagggtcttaata
ttttcacagatgacaaggctcctagacattctggaagattacttgatgtttcgtggatac
ctgtattgtcgaattgatgggaatacaggtggggaggaccgtgatgcttccattgatgcc
ttcaataagcctggaagtgagaaatttgtttttttgctatcaacacgagctggaggcctt
ggtattaatcttgccacggccgatgttgtcattctttatgacagtgattggaacccacaa
gtagatttgcaagctcaggatcgtgctcacaggattggtcaaaagaaagaagttcaagtg
tttagattctgcacagagtatactattgaggagaaagtcattgagagggcttacaagaag
cttgcgctggatgctttggttatccaacagggacgtctagcagagcaaaaaactgttaac
aaggatgagctgcttcaaatggtgaggtttggtgctgaaatggttttcagttccaaagat
agtacaattacagatgaagacatagataggattattgcaaaaggagaagaggcaacagct
gagcttgatgcaaagatgaagaaatttactgaagatgctatcaagtttaaaatggatgat
actgctgaattatatgattttgatgatgagaaggatgagaacaagttagactttaaaaaa
attgttagtgacaactggattgagccaccaaaaagagagcgaaagcgcaattattcggaa
tctgagtatttcaagcaaacaatgcgtcaaggtggtcctaccaaaccaaaggagcctagg
attccccgaatgcctcaattacatgattttcagttttttaacacacaaagattgagtgag
ctatacgaaaaagaagtacgctacctaatgcaaacacatcaaaagaatcagataaaagat
acaatagatgttgaagaacctgaagaggtgggagatccattgactgctgaagagctcgag
gaaaaggaacgacttctagaagatggtttttcttcatggagtagaagagatttcaatact
ttcattagggcttgtgagaagtatggtcgaaatgacataaaaagcattgctttggaaatg
gagggaaaaacagaagaggaagttgaaagatatgcaaaagcttttaaagaaagatacaag
gagttaaatgattatgatcggatcataaagaacattgaaagaggtgaagcaaggatttct
cgtaaagatgaaattatgaaagctattggaaagaagctggatcgctacaagaatccatgg
ctggaattgaaaatccagtatggtcagaacaaggggaagttgtacaatgaagaatgcgac
cgattcatgatctgtatggtgcacaaacttggctatgggaactgggatgagttgaaggca
gcatttcgcacttcaccgttgtttcgttttgattggtttgttaagtctcgcacaacacag
gagctcgcaaggaggtgtgatacattaattcgattggtggagaaagaaaaccaagaatat
gatgagagagagaggcaagcacgcaaagagaagaagcttgctaagaacatgaccccatcc
aagcgagccctgtctaggcaggcaactgagagcagccctagctcactgaagaagaggaag
cagttaaccatggacgattatgttagttcgggtaagagaaggaaatga
DBGET
integrated database retrieval system
