Humulus lupulus (common hop): 133819822
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Entry
133819822 CDS
T11341
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133819822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133819822
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133819822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_14
AAA_16
AAA_22
AAA_2
AAA_28
RNA_helicase
AAA_17
NPHP3_N
AAA_33
nSTAND3
AAA_18
IstB_IS21
AAA_3
Rad17
Parvo_NS1
Viral_helicase1
Mg_chelatase
ATPase_2
NACHT
Bac_DnaA
Nucleolin_bd
TsaE
NB-ARC
ABC_tran
Cytidylate_kin2
AAA_11
AAA_19
TTC3_9th
tRNA_lig_kinase
Zot
Motif
Other DBs
NCBI-GeneID:
133819822
NCBI-ProteinID:
XP_062109160
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All DBs
Position
2:complement(293191000..293196477)
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AA seq
816 aa
AA seq
DB search
MGKKFSGRRGGGSSLSQSKRNMLLRRVDSFKHFHSSTLDEIVDHLRSSYPDYKRSQLQPF
TRFVQQTLDSTPRRPKNPSLIFDDECGGTSTSSRKKPKKGAPDESEERLRRLEEVHVARI
RQSGQDSSSESEEPSSSEEGSGESDEVTSEDAVYGEQMEPKFDLMKAMLRESYKDPNSAT
AKSKVVEKEKNIEMELPDREKVGFSSDGRAPNRLPNESKKEAKGSSSVTDVEVKGNDGPR
FKDLGGMKEVLEELEMEVIVPLYHPQLPRWLGVRPMAGILLHGPPGCGKTKLAHAIANET
GVPFYKISATEIVSGVSGASEENIRELFLKAQRTAPSIVFIDEIDAIASKRENLQREMER
RIVTQLMTCMDESHRLVKPTDENTESQSHGYVLVIGATNRPDAVDSALRRPGRFDREIVL
GVPDENARAEILSVLTRDLRVEGSFDLLKIARATPGFVGADLAALANKAGNLAMKRILDE
RKSKLSRNCIDEEYNEGWWKEPWLPEEMERLNITMADFEESVKLVQPSSRREGFSAIPNV
KWEDVGGLDLLRQEFDRYVVRRIKHPEEYEGFGVELETGFLLYGPPGCGKTLIAKAVANE
AGANFIHIKGPELLNKYVGESELAVRTLFRRARTCSPCILFFDEVDALTTKRGREGGWVV
ERLLNQLLIELDGADQRRGVFVIGATNRPEVMDNALLRPGRFGKLLYVPLPSSDERGSIL
KALARKKPVDASVDLNAIGRMEACENFSGADLSSLVNEAAMAALEEKLTTTEARSEGAVC
TIKTPHFELALTKLSPSVNVKQKQYYKILSESFQSG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagttctccggcagaagaggaggaggcagttccctctctcaatcaaagcga
aacatgctcctccgtcgcgtcgattccttcaagcacttccattcctccaccctcgacgaa
atcgtcgatcatctccgttcctcttaccctgattacaagcgttcccagctccaacctttc
accaggttcgtccaacaaaccctagactccacaccccgccgccccaagaacccatctttg
atcttcgacgacgaatgtggtggaacgagcacctcctcccgtaagaagcctaagaagggg
gctcctgatgagagcgaggagagattgcgacggttggaggaagttcatgtagccaggatt
cggcagagcggtcaagacagttcgtctgagtcggaggagccttcgtcgtcggaggaaggg
tctggcgagagcgatgaggtgacctcggaggacgctgtctatggggagcagatggagccg
aagtttgaccttatgaaagcgatgcttcgggagtcgtataaggatcctaatagcgctaca
gccaagtctaaggtggtggagaaggagaagaatattgagatggagcttcctgatcgtgaa
aaggttgggttttcgagtgatggccgagcaccaaataggttgcctaatgagtcgaagaag
gaagcaaagggttcaagttcggtgacggatgttgaggtgaaggggaatgatggtccgagg
tttaaggatttgggtggtatgaaggaggtgctggaggagcttgagatggaagttatcgtg
ccactttaccatcctcagcttccacggtggcttggagttcgacccatggcgggtattctc
ttgcatggtcctccgggctgtggcaagaccaaattagcgcacgccattgccaatgagact
ggagtaccattttacaagatttctgctactgaaatcgtctctggtgtctcaggtgcatct
gaagaaaatataagggagcttttcttgaaagcacagaggacagccccgtcgattgtattt
attgatgaaattgatgctattgcttcaaaaagagaaaatttacaaagagagatggaacgg
cgaattgtaacacaactgatgacttgcatggatgaatctcacaggctggtaaagccaact
gatgaaaatacagaatcacaatctcatggttatgttcttgttattggagctactaacaga
cctgatgctgttgattctgcacttaggagacctgggcgttttgatcgagagattgtctta
ggtgtgccagatgaaaatgcaagagctgagattctttctgtccttactagagacctaagg
gttgaaggttcgtttgatctattgaaaatagcaagggctaccccaggttttgttggagct
gatttggctgcgctggctaacaaggcaggtaaccttgcaatgaaaagaattctagatgaa
agaaagtctaagttatcaagaaattgtatagatgaggagtataatgaagggtggtggaag
gaaccttggcttccagaagaaatggaaaggcttaacatcactatggctgattttgaggaa
tctgttaaactggttcaaccttcttcaagaagagaaggattctctgccattcccaatgta
aaatgggaagatgttggtggtctagatcttttgaggcaagagttcgatcgatatgttgtt
aggcgtattaaacatcctgaggaatatgagggtttcggagtagaattagagacaggattt
ttgctgtatgggcctccaggatgtggcaagacattgatagcaaaagctgttgctaatgaa
gcaggagctaacttcattcatattaagggtcctgaacttttgaataaatatgttggcgaa
agtgaactggcagtacggacattatttagacgtgcgaggacttgttcaccatgcatactt
ttctttgatgaggtggatgccttgacaaccaagcgcggaagagaaggtggatgggttgtt
gagcggctcctgaaccagctactcatagagttagatggtgcagatcagcggcgaggtgta
tttgtaattggtgccacaaatagacctgaagttatggacaatgctcttctccggcctgga
aggttcggcaagcttctctacgtacctctgccaagttctgatgaacgtggttcgatcttg
aaagctttagcaaggaagaagccagtagatgctagtgtggatttgaatgccattggacgg
atggaggcgtgtgagaattttagtggcgccgacctatcatcactggtaaatgaagctgct
atggctgctcttgaagagaaactgactacaacagaagccagatcggaaggagctgtatgt
accatcaaaacacctcactttgagctcgccctgactaaattatctccgtcggttaatgtc
aagcaaaaacagtactacaagatattatcagagagcttccaatcaggatga
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