Humulus lupulus (common hop): 133821880
Help
Entry
133821880 CDS
T11341
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlp03016
]
133821880
Transfer RNA biogenesis [BR:
hlp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
133821880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
TFIIIC_delta
NBCH_WD40
Beta-prop_LRRK2
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
133821880
NCBI-ProteinID:
XP_062110029
LinkDB
All DBs
Position
3:complement(5138815..5143989)
Genome browser
AA seq
830 aa
AA seq
DB search
MSNSGGVGVKRVLIGAGCNRIVNNVSWGASDLVSFGAQNAVVIFSPKTAQILTTLPGHKA
SVNCTHWLPNAKFAFKAKHLERHYLLSGDADGTIILWELSLLEGKWRNVSQVPESHKKGV
TCITGIMVSESEAVFASTSSDGTVHIWEVAFPANSGGDCKLICLDSISVGSKPMVALSLA
ELPGNNGRLVLAMGGLDNKIHLYCGGRSEKFVRACELKGHTDWIRCLDFSLAIYSNGNTE
TILLVSSSQDKGIRIWKIVLLGDRKEEVSLASYIKGPVLVAGTVSYQVSLESLLIGHEDW
VYSVEWQPPSASGDRVAYCQPQSILSASMDKTMMIWQPERTSGIWMNVVTVGELSHCALG
FYGGHWSSNGDSILAHGYGGSFHLWRNVGVDLDNWQPQKVPSGHFAAVADISWARNGEYL
LSVSHDQTTRIFAPWKNEASLDRDGWHEIARPQVHGHDINCVTIIRGKGNHRFVSGADEK
VARVFEAPLSFLKTLGHAISQNSIFEDIQTGVQVLGANMSALGLSQKPIYVQTENNITSS
RVGNESIDTLETIPDAVPVVLTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCNHEGNL
VASSCKAQSATVAEIWLWEVGSWKAVGRLQSHSLTVTQMEFSHDDKLLLTISRDRQFSVF
AINGTGTEEISHQLIARQEAHKRIIWACSWNPHGYEFATGSRDKTVKIWGLENQSSVKPL
LTLPPFKTSVTALSWVGLGSNRNNDLLAVGMENGLIELWSLSINRTNDGAIGVPAATAAP
FAQLDPVMCHVSTVNRLAWRNPEKRDDECCLQLASCGADHCVRVFDVKVT
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatagcggcggagttggggtgaagagagtgttgatcggagcagggtgcaaccga
atagtcaacaacgtttcatggggcgcctccgatttggtatcctttggagctcaaaacgcc
gtcgttatattctccccaaagactgctcagattttgactactcttccgggtcacaaggct
tctgtcaactgtactcactggctccctaatgctaaatttgcttttaaagctaagcactta
gagcggcattatctgctttctggggatgctgatggcaccattattttatgggaattatct
cttcttgaaggaaagtggaggaatgtatcacaagtaccagaatcacacaagaagggtgtc
acttgcattactggaattatggtttctgaatctgaagcagtctttgcgtctacatcttcg
gacggcacagttcacatatgggaggtggcttttcctgctaatagtggaggtgactgtaaa
ttgatatgcctggattctatctctgttggttcaaagcctatggttgcgctttctttagca
gaactgcctggaaataatggacgtttagtattggcaatgggaggcttggataacaaaatt
catctctactgtggggggaggtctgaaaagtttgtccgtgcttgtgagttgaaagggcat
acagattggatccggtgtttagatttctcgttagctatatattccaatggcaacacagaa
actattctacttgtaagttcatctcaggacaagggcatacgcatatggaagattgtgctg
cttggtgacaggaaagaagaagttagtttagcttcttatataaaaggccctgtacttgtt
gctggcacagtgtcatatcaagtttctttggaatctctgctaattggacatgaggattgg
gtatattcagtagaatggcaaccgccatctgcttctggagacagggttgcttactgtcaa
ccccagagcattttatctgcatcaatggacaagacaatgatgatctggcaaccagagagg
acttctggtatctggatgaatgttgtcactgttggtgaattaagtcattgtgcattgggg
ttttatggtggtcactggagctcaaatggagattccatattagctcatggatatggtgga
tcatttcatctctggagaaatgttggtgttgacttggataactggcagccgcaaaaagtt
ccatcagggcattttgccgcagttgcagatatttcatgggcaaggaatggtgaatacttg
ctgtctgtcagtcatgaccagacaactcggatatttgctccttggaaaaatgaagcttct
cttgatagggatggctggcatgaaattgctcgccctcaagtccatggtcatgacatcaac
tgtgttactattattagagggaaggggaaccaccgatttgtcagtggagctgatgaaaag
gttgccagagtatttgaagctccgttgtcctttctaaagacactgggtcatgccatttca
cagaatagtatttttgaagacatccaaacaggtgttcaggttttgggtgcaaacatgtct
gctcttgggctatcacaaaagcctatttatgtccagactgagaacaacatcacatcaagc
agggttggtaatgagagcatagacacacttgaaactatccctgatgcagtcccagtagtg
ttgactgaaccccccattgaagatcaactggcatggcatacactgtggccagagtcacac
aaactctatggtcatggtaatgaacttttttctttatgctgtaatcatgaaggaaatctt
gttgcctcgtcatgtaaggcccagtcagcaacagtagcagagatatggctatgggaagtt
ggttcatggaaggcagttggtcgtttgcagtctcacagtttgacagtgactcagatggaa
ttctcccatgatgacaaattacttttgaccatttcaagggaccgccagttctctgttttt
gcaatcaatgggacaggcacagaggaaataagtcaccagctgatagcaaggcaggaagca
cacaagagaattatatgggcatgctcatggaacccgcatggttacgaattcgcaaccggt
tcaagagacaagaccgtgaaaatttggggtctggaaaatcaatcatcagtcaagcctctc
ttaactttgccacccttcaaaactagtgtcacagcactctcttgggttggtctcggcagc
aacagaaacaatgatttacttgcagttggaatggaaaacggactcattgagctatggagt
ctatccataaaccgaactaacgatggcgctataggagtccccgctgcaactgctgctcct
tttgcccagcttgatcctgtcatgtgccacgtgtccacagtaaatcgtttagcatggaga
aaccccgaaaagagggacgacgaatgttgtttgcagcttgcctcttgtggagctgaccac
tgtgtgagagtgtttgatgtaaaggtaacttaa
DBGET
integrated database retrieval system
