Humulus lupulus (common hop): 133822618
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Entry
133822618 CDS
T11341
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133822618
03036 Chromosome and associated proteins [BR:
hlp03036
]
133822618
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133822618
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133822618
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133822618
microRNA pathway
RISC loading complex
133822618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133822618
NCBI-ProteinID:
XP_062110997
LinkDB
All DBs
Position
3:45244749..45252430
Genome browser
AA seq
1081 aa
AA seq
DB search
MVRKRRTDHPGGGEGSESQESGGGSSAGGRGSQRPAERGGGQMQHGGGGGGGGHQGGRGW
APQGGRGGYGGGGGGGGGGGGRGRGQPQQQQYGGPPEYQGRGRGGPPHQGGRGGYGGGRG
PGGMGGNRGGGPTGGPSRSQDSELHQATPPQYRAGVHQPLPSEASSSSLPPEPSQLAQQI
EQIDLQQDAPTGQEIQAAPPSSKSMRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYD
VTITPEVTSRGVNRAVMEQLVKLYKESHLGRRLPAYDGRKSLYTAGPLPFISKDFKITLI
DEDDGTGGQRREREFRVVIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTR
YCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDF
VTQLLNRDVSARPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATGELTFPV
DDRGTMKSVVEYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEK
QITALLKVTCQRPYDREKDILQTVEHNAYHNDPYAREFGIKISERLAQVEARILPAPWLK
YHDTGREKDCLPQVGQWNMMNKKMVNGGTVNSWMCINFSRNVQEAVARGFCYELAQMCYI
SGMAFNPEPVLPPVNGRPDQVEKVLKTRYHDAMSRLQPQGKELDLLIVILPDNNGSLYGD
LKRICETDLGLVSQCCLTKHVFRMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSD
RPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQ
DPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRRACASL
EPNYQPPVTFVVVQKRHHTRLFANNHSDRNAVDKSGNILPGTVVDSKICHPTEFDFYLCS
HAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFR
ARFYMEPETSDSGSMTSGAAAGRGGMGPGAGGRSTRAPGVNAAVRPLPALKDNVKRVMFY
C
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaaagaggagaactgatcatcctggtgggggcgagggctctgaatctcaggaa
tctggtggtggtagtagtgctggtggtcgtggttcccaacgccctgctgaaaggggtggt
ggtcaaatgcaacatggtggtggtggtggtggtggagggcaccaaggtggtaggggttgg
gccccacaaggtggccgaggaggctatggtggtggtggtggtggtggtggcgggggcggt
ggtcgcggtcgtggacagcctcaacagcagcagtatggtgggcctcctgagtatcaagga
aggggaaggggcgggccaccccatcagggtggtcgtggagggtatgggggtggacgtggc
cctggtggtatgggcggtaaccgtgggggaggacctacaggtggaccgtccaggtcacaa
gattccgagctgcaccaagcaaccccacctcaatatcgagctggggtccatcagcctctt
ccatccgaggctagttcttcttctttgccacccgagccttcacaattggctcagcagatt
gagcagatcgacttacagcaagatgctcctactggccaggaaatacaagctgcgccaccc
tcaagcaagtcaatgaggtttcctcttcggccaggcaagggtagcactggcatcagatgc
attgttaaggcaaatcacttttttgcggaactcccagataaggatttgcatcagtatgac
gtcacaattacacctgaggttacttcacgtggtgtcaatcgagctgttatggaacagttg
gtaaaattgtacaaggaatctcatcttggaaggcgtctccctgcctatgatggtcggaag
agtctatatactgctggaccgcttcctttcatttctaaggatttcaaaataactcttatt
gatgaggatgatggcacaggcgggcaaaggagggagagggagtttagagttgttattaaa
ttggctgcacgcgctgacctgcaccatttaggactctttttgcagggaagacaagctgat
gcaccacaggaagcacttcaagtccttgatattgttctgcgtgagttgcctactactagg
tattgtcctgtgggtcgatcattttattcccccgatcttggtagaagacagccacttggg
gagggtttggaaagttggcgtggtttctatcagagtattcgcccaactcagatggggcta
tctcttaatattgacatgtcctccactgcattcattgagccattacctgtaatcgatttt
gtaactcagcttcttaatcgggatgtttctgcccgaccactgtctgattctgatcgtgta
aagattaaaaaagctttgcgtggagtcaaggttgaagttactcatcgtgggaatatgcgt
agaaagtatcgtatttctggcttgacatcacaagcaacaggagagttgacttttccagtg
gatgacagaggcactatgaaatctgttgttgagtacttctatgaaacttatgggtttgtt
attcagcatactcaatggccttgcctacaagtagggaaccagcagagacctaattattta
cccatggaggtttgtaaaattgtggagggtcagagatactctaagaggttgaatgagaag
cagattactgctttgctgaaggttacctgtcagcgtccctatgatagggagaaagatatt
ttgcagactgttgaacacaatgcttatcataatgatccatatgctagggagtttgggatc
aaaatcagtgagaggcttgctcaggttgaagctcgtattctacctgctccctggcttaaa
tatcatgatacaggtagagaaaaggattgcctacctcaagttggacaatggaatatgatg
aacaagaaaatggtcaatggtggcacagtgaacagttggatgtgcataaacttttctcga
aatgttcaagaagctgtcgctaggggtttctgttatgaacttgctcagatgtgttatatt
tctggcatggcatttaatccagagccagtactaccacctgttaatggtcgtcctgatcag
gttgaaaaggttctgaaaactcgctaccatgatgctatgagtcgacttcaaccccaggga
aaggagctggatctgcttattgttattttaccagataataatggctcgttatatggtgat
ttgaaacgaatttgtgagacagatcttggccttgtatcccagtgctgtttgacgaagcat
gtcttcaggatgagtaagcagtatctggcaaatgtggccttgaaaataaacgtcaaggtt
ggaggaaggaatactgttttggttgatgccatatcaaggcgtattcctctagtcagcgac
cgccccactataatttttggtgctgatgttactcatcctcatcctggggaggattcaagc
ccttctattgcagctgttgtggcttctcaagattggcctgaagttacaaagtatgctggt
ttggtctgtgctcaagcccatcgacaagagctcatccaagatctgtttaaaacatggcag
gatcctgtcagggggacagttacgggcggcatgatcaaggagctgctcatttcgttccgt
agggcaactggacaaaagcctcaacgcattatattctacagggatggtgtcagcgagggt
cagttctatcaagttttactttatgaacttgatgccattcgcagggcttgcgcttcactg
gaaccaaactaccagcctccagtgacatttgttgttgttcagaagcgtcatcatactagg
ctgtttgccaacaatcattctgaccgtaatgctgttgataaaagtggaaatatattgcca
ggtacggttgtggactccaagatctgtcatccaactgagtttgatttctatctctgcagc
catgctggaatacagggtactagccggcctgcacattatcatgtactgtgggatgagaac
aagttcactgctgatgggttgcaatctttaacaaataatctttgctacacgtacgcaaga
tgcaccagatctgtttcaatagttcctcctgcatactatgcccatcttgctgctttccga
gctcggttctacatggagccagagacatcagacagtggttcaatgaccagtggtgctgct
gctggccgtggaggaatgggtccaggtgctggcggacgtagcacaagagcccccggcgta
aatgctgcagtgagacccttgcctgccctcaaggacaatgtcaagagggttatgttttac
tgttga
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integrated database retrieval system
