Humulus lupulus (common hop): 133823513
Help
Entry
133823513 CDS
T11341
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133823513
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hlp01002
]
133823513
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hlp04121
]
133823513
Enzymes [BR:
hlp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133823513
Peptidases and inhibitors [BR:
hlp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133823513
Ubiquitin system [BR:
hlp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133823513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
133823513
NCBI-ProteinID:
XP_062112304
LinkDB
All DBs
Position
3:239586871..239598300
Genome browser
AA seq
1122 aa
AA seq
DB search
MTMMTPPPLDQQEDEEMLVPHSDLVEGPQPMEAAQVEPANTVENQTVENQPVEDPPSIKF
TWTIENFTRLNVKKHYSDVFVVGGYKWRILIFPKGNNVDYLSMYLDVADSSTLPYGWSRY
AQFSLAVVNQMHNKYSIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLMNDTCLVEA
EVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDM
PSGSIPLALQSLFYKLQYNDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKM
KGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVE
RLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQL
DLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLTDQWYKFDDERVT
KEDMKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
IAEHLRVRLKKEQEEKEDKKRYKAQAHLFTIIKVARDEDLSEQIGKDIYFDLVDHDKVRS
FRIQKQTPFNQFKEEVAKEFGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEETQSVGQLRE
VSNKTHNAELKLFLEVELGPDLRPIPPPDKTKEDILLFFKLYDPEKKELRYVGRLFVKSS
GKPLEILGKLNQMAGFASDVEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQK
SPLPETEVESKYPDVPSFLEYVHNRQIVHFRALERPKEDDFCLELSKIHSYDDVVERVAR
QIGLDDPSKIRLTAHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQVTSDILYYEVLDIPLP
ELQGLKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINVLKTKVELSRPDAELRLLEVFY
HKIYKIFPHTEKIENINDQYWTLRAEEIPEEEKNLGAHDRLIHVYHFTKETAQNQMQVQN
FGEPFFLVIREGETLAEVKVRIQKKLQVPDDEFSKWKFAFLSLGRPEYLQDSDVVSSRFQ
RRDVYGAWEQYLGLEHSDNAPKRAYAVNQNRHAYEKPVKIYN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactcctccgccgttggatcagcaagaagacgaggagatgctcgtgccg
cattcggatttggtcgagggaccccagccaatggaagcagctcaagtggagcccgctaat
acggtcgagaatcaaactgttgagaatcaaccagtagaggatcctccatcaattaaattt
acttggacaattgagaactttacaaggctgaatgtaaaaaagcactattctgacgttttc
gtcgtggggggttataaatggcgaatactaatttttcccaaggggaataatgtagactat
ctgtcaatgtatttggatgtggccgattcttcaacattgccatatggatggagtagatac
gctcagttcagcttggctgtcgttaaccagatgcataacaagtactcaattagaaaggac
acacagcaccagtttaacgcaagggaaagtgactggggtttcacatcattcatgcctcta
agtgatctttatgaccctagtagagggtatctaatgaatgacacttgtttagttgaagcc
gaggtagctgtccgcaaggttcttgattactggtcttatgattctaaaaaggaaactggt
tatgttggactcaagaatcagggagcaacttgttacatgaattctctgctccagacattg
taccatattccttatttcagaaaggctgtgtaccacatgccaactactgagaatgatatg
ccatcgggaagcatcccacttgcgctacagagtttattctataagcttcaatataatgac
agcagtgttgccacaaaagaattaaccaagtctttcggatgggatacatatgattctttt
atgcaacatgatgtgcaagaactcaacagggtactttgtgaaaagcttgaagacaaaatg
aagggaactgttgtggaggggacgatacaacaattatttgagggtcatcacatgaattac
atagagtgcataaatgtagactacaaatctacaagaaaggaatcattttatgaccttcag
cttgatgtgaaagggtgtcgggatgtttatgcctcttttgacaagtatgtggaagttgaa
cgtcttgagggtgataataaatatcatgctgaagaacatggtttgcaggatgctaagaag
ggtgtcttatttattgacttcccacctgtccttcaacttcaactaaagcggtttgaatat
gattttatgcgggacacgatggtcaagatcaatgaccgctacgagtttcctcttcaactt
gatcttgacagagaaaatggaaaatatctatcacctgatgctgatagaagtgtccgcaac
ctttatacacttcatagtgtcttggttcatagtggtggggtgcatggtggacactactac
gcttttattaggccaaccctcacagatcagtggtacaaatttgatgatgaacgtgtgaca
aaagaagatatgaaaagggcactagaagagcagtatggtggcgaggaagagttgccacag
accaaccctggttttaataatactcccttcaagtttacaaaatactctaatgcatacatg
cttgtgtatataagggaaagtgacaaggacaaaataatttgtaatgttgacgagaaggac
atagctgaacatttaagggtaagattgaagaaagaacaagaagaaaaggaggataagaaa
agatataaagcacaagcccacctttttactattataaaggtagcacgagatgaggacctt
tctgaacagattggaaaagatatatattttgaccttgtagatcatgacaaagttcgtagt
ttccgtattcagaaacagacaccctttaaccaattcaaggaagaggttgcaaaagagttt
ggaatacctgtgcaatttcaacggttctggatttgggcgaaacggcaaaatcacacatac
cgccccaatagacctttgacacctcaggaggaaacacaatcagttggacagttgagagag
gtctcaaataagacacataatgcagagcttaaattgtttttggaagttgagctcggaccg
gatttacgtcctattcctccgcctgataaaactaaggaagatatactactctttttcaag
ctttatgatcctgagaaaaaggagctacgatacgttgggagactttttgtgaagagctct
ggtaagccattggaaattttaggaaaacttaatcaaatggctggctttgcttctgatgta
gaaattgaactttatgaggagataaagtttgaaccttgtgtcatgtgtgaacaccttgat
aagaggacctcttttcggttgagtcagatagaagacggggacattatttgctttcagaaa
tctcctctacctgaaactgaagtagaaagcaaatacccagatgtgccttcatttttggaa
tatgtacacaatcgacagattgttcactttcgagcattggagagaccaaaggaggatgat
ttctgtttagaactgtcaaagatacacagctatgatgatgtggttgagagagtggctcgc
caaataggtttggatgatccatccaaaatcaggctaacagctcataattgttattctcag
caacctaagccccagcctataaaatatagaggagtagaacatttgtcagacatgctagtc
cattacaatcaagtaacctccgatattttgtactatgaagttttggacatccccctgcca
gaactacaaggtttaaaaaatctgaaagttgcttttcatcacgcaacaaaagatgaggtg
gttattcacaacatcagattaccaaaacagagcactgttggagatgtgatcaacgtactt
aaaacaaaggtagagttgtctcgtccagatgcagaactcagactgcttgaggttttctac
cacaagatatacaagatctttccacacactgaaaagatcgagaatataaatgatcaatac
tggaccttgcgagcagaggagattccggaggaagagaaaaacctgggtgcccatgatcgc
ttaattcatgtctaccacttcacaaaggagactgcacaaaaccagatgcaagtccaaaat
tttggtgaacccttcttcttggtcattcgtgaaggtgagactttagctgaagtgaaggtg
cgtattcaaaagaagttgcaggttccagatgatgagttttctaagtggaagtttgctttc
ttatcgcttggtcgtccagagtacctgcaggattctgatgtagtttcaagtcgtttccag
agaagagatgtatatggtgcttgggaacagtaccttgggttggagcactctgataatgct
cctaagagggcttatgcagtaaatcagaaccgacacgcatacgagaagccagttaaaata
tacaactaa
DBGET
integrated database retrieval system
