Humulus lupulus (common hop): 133824569
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Entry
133824569 CDS
T11341
Name
(RefSeq) cysteine protease ATG4-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133824569
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hlp01002
]
133824569
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hlp04131
]
133824569
03029 Mitochondrial biogenesis [BR:
hlp03029
]
133824569
Peptidases and inhibitors [BR:
hlp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
133824569
Membrane trafficking [BR:
hlp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
133824569
Mitochondrial biogenesis [BR:
hlp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133824569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
133824569
NCBI-ProteinID:
XP_062113474
LinkDB
All DBs
Position
3:complement(279539975..279544509)
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AA seq
442 aa
AA seq
DB search
MVNFLSSAFSVFEAHSESSSPVACDKKSIRSRYAKWTTAVRKAVTGGSMRRFHERILGSS
RTGISNSTSDIWLLGICYKISPDDSFVDFPTNGGLADFENDFSSRILMTYRKGFTAIEDL
KYTSDVNWGCMLRSSQMLVAQALVFHRLGRSWRRSLQKPLDQDYIDILHLFGDSEASPFS
IHNLLVAGKAYNLTAGSWVGPYAMCRSWETLVRCKRESSDFENQPLPMAVYVVSGDEDGE
RGGAPVVCVEDAFRHCSEFARGQANWTPILLLVPLVLGLETINPRYIPALRATFTFPQSL
GIMGGRPGASTYLVGVQDDKAFYLDPHEVQPIIDIGRNSVEADTSSYHSSVVRHVALDSI
DPSLAIGFYCRDKDDFDDFCLRGNKLAEESNGAPLFTVTQSLPKPVSHSNVLGDSSEVSD
SFEALPSNNADDCSHEDEWQLL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggtcaactttctttcatctgcattctccgtctttgaagcacatagtgagtcatcgtcg
ccggttgcctgtgataagaagtcgattcgttcaagatacgctaagtggacaacagctgtg
agaaaggctgtgactggtggctcaatgagaagatttcacgagcgtatacttggatcttct
agaactggcatatctaactcaaccagtgacatatggcttcttggtatatgttataaaatc
tccccagatgattcctttgtagattttcccactaacggtggcttagcagattttgaaaat
gacttttcatcaagaattctaatgacatatcgtaaaggtttcactgctattgaagattta
aagtacactagtgatgtaaactggggttgcatgcttcggagtagtcagatgctagtggct
caggctttggtttttcatagactgggacgatcttggagaagatcattacaaaagcccttg
gaccaagattacattgacattttgcatctatttggcgattcggaagcatcacctttttcc
atccacaaccttcttgtagctggaaaggcttacaaccttactgcaggatcatgggtgggc
ccatatgctatgtgtcgctcatgggaaactctagtgagatgcaagagagagagcagtgac
tttgagaaccagccacttcccatggctgtttatgttgtttctggagatgaagatggcgaa
cgaggtggagccccagttgtatgtgttgaagatgcctttagacactgctctgagtttgcc
agaggtcaagcaaattggacacctattcttttattggtccctttggttctcggactcgaa
acaatcaatcccaggtacataccagctttacgggctacattcacgtttcctcaaagtctt
ggtataatgggtggtagacctggtgcgtcaacttaccttgtaggtgtgcaagatgataaa
gcattttaccttgatcctcatgaagtgcagccgataattgatattggtaggaatagtgta
gaggctgatacttcatcttaccacagcagtgtcgtgaggcatgtcgccctcgattccatt
gatccatcattagcaattggattttattgccgtgataaagatgattttgatgacttttgt
ctccgggggaacaagttggcagaagaatcaaacggtgcaccattgttcacagtgacacaa
agtctgccaaagcccgttagccacagtaatgtcttgggtgatagtagcgaggtcagtgat
tctttcgaagcactgcctagtaacaacgcagatgattgttcacacgaagacgagtggcaa
ctgctttga
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