Humulus lupulus (common hop): 133829887
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Entry
133829887 CDS
T11341
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133829887
Enzymes [BR:
hlp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133829887
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
90S particles
Helicases
133829887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
133829887
NCBI-ProteinID:
XP_062115697
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All DBs
Position
4:complement(8721832..8725750)
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AA seq
491 aa
AA seq
DB search
MEEEDFIVNQSFPLFKPSKNPKPLPEPTAALDSHNSNAEPHFERSTNADPIPTTTTFKDL
GLTEWAVETCNELGMKKPTPVQAHCIPKILAGRDVLGLAQTGSGKTAAFALPIMHRLTED
PFGVFALVVTPTRELAYQLAEQFRALGSAVHLRCSVIVGGTDMLTQMKNLVARPHVVIAT
PGRIKVLLENSEIPPVFSNTKFLVLDEADRVLDVGFEEELRMVFQCMPKNRQTLLFSATM
TENLQTLLELSANKAYFYEEYQGFKTVDTLKQHYLLVPNDVKDVYLVHILSKMEDMGVRS
AMVFVSTCRSCHLLSLLLEELEQTAVAMHSFNSQPLRLSALHRFKSGRVPILLATDVASR
GLDIPTVDLVINYDIPRFPRDYIHRVGRTARAGRGGLAISFVTQTDVDLVHGIEADIGKQ
LEKFECKEHEVLADIKKIYSARRVAIMKMRDDGFEEKAKDRKKQKLKTLAEKGLLDKRSR
RRKRQKRTAEQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagatttcatagtaaaccaaagcttccctctttttaaaccctccaaaaac
cctaaacctctcccggaacccaccgccgcccttgactctcacaattccaatgcagagccg
cactttgagaggtcgacaaacgccgatcctattcccactaccaccactttcaaggatctc
gggctcacggaatgggccgtggagacctgcaatgagctcgggatgaagaagcccacgccg
gtccaagctcattgcattccgaagatcctcgccggccgggatgtgctgggactggcccag
accggtagtggtaagacggcggctttcgctctaccgattatgcatcggttgacggaggac
ccctttggggtgttcgcgctggtggtgactccgacgagggagctggcgtaccagttggct
gagcagtttcgggcactgggttcggccgtacacttgcgttgctctgtcattgttggaggg
acggatatgcttacgcagatgaagaacttggttgcgaggcctcatgtcgtgattgcgact
ccgggtagaattaaggtcttgctcgagaattctgagattcctcctgtcttctccaatact
aagtttctggttttggatgaagcagatagggttttagatgttggttttgaagaggagttg
agaatggtgtttcagtgcatgccaaagaatcgtcaaactttattgttctctgcaacaatg
actgaaaacctgcagacgctgctggagctttctgcgaataaggcatacttttatgaggaa
tatcaagggtttaagacagttgatactctcaagcagcactatcttcttgtaccgaatgat
gtcaaggatgtatatctggtccatattttgtctaaaatggaagatatgggtgttcggtcg
gccatggtatttgtctcgacttgcagaagttgtcacctattgagtttgttactggaggag
cttgagcaaacagctgtggcaatgcattcattcaattctcaacccctcaggctctctgca
ttacaccgcttcaaatctggaagggttcccatattgcttgcaactgatgttgccagtcgc
ggtttggatattcccacagttgatcttgttatcaactatgatattccaaggtttccaaga
gattacattcaccgtgtcgggcgtacagcaagggcaggcagaggaggcttggctatcagc
tttgttacccagactgatgtagacctcgttcatggaatagaagctgatattgggaaacaa
ttggaaaagtttgaatgcaaagagcatgaggtgcttgctgacataaaaaagatttacagt
gccaggcgagtggcaataatgaaaatgagggatgatggctttgaagagaaagccaaagac
cggaaaaagcagaagctaaagacactagcagagaaaggattattggataagagaagtaga
aggagaaaaagacagaaaagaacagctgaacaatag
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