KEGG   Humulus lupulus (common hop): 133829908
Entry
133829908         CDS       T11341                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03018  RNA degradation
hlp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133829908
  09123 Folding, sorting and degradation
   03018 RNA degradation
    133829908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hlp03019]
    133829908
   03041 Spliceosome [BR:hlp03041]
    133829908
Messenger RNA biogenesis [BR:hlp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133829908
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     133829908
Spliceosome [BR:hlp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    133829908
SSDB
Motif
Pfam: LSM RimP_C
Other DBs
NCBI-GeneID: 133829908
NCBI-ProteinID: XP_062115733
LinkDB
Position
4:9018008..9020672
AA seq 98 aa
MSGGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISIVGELDEEIDSSVDWSEKRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtctggtggccctggacttgagtctctagtagatcaaacaatatcagttatcacaaat
gatgggcgcaatattgtgggagttttaaaaggctttgaccaggctacaaatatcattctc
gacgagtctcatgaacgtgttttctcgacaaaggaaggtgttcagcaactagtgttgggt
ttgtatataataagaggcgacaacataagtatcgtcggagaattagatgaagaaatcgat
tcgtctgttgactggtcggaaaaaagagctcatcctctaaagcctgtcattcattga

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