Humulus lupulus (common hop): 133829908
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Entry
133829908 CDS
T11341
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03018
RNA degradation
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133829908
09123 Folding, sorting and degradation
03018 RNA degradation
133829908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133829908
03041 Spliceosome [BR:
hlp03041
]
133829908
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133829908
mRNA degradation factors
5'-3' decay
Lsm complex
133829908
Spliceosome [BR:
hlp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
133829908
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
133829908
NCBI-ProteinID:
XP_062115733
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All DBs
Position
4:9018008..9020672
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AA seq
98 aa
AA seq
DB search
MSGGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISIVGELDEEIDSSVDWSEKRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggccctggacttgagtctctagtagatcaaacaatatcagttatcacaaat
gatgggcgcaatattgtgggagttttaaaaggctttgaccaggctacaaatatcattctc
gacgagtctcatgaacgtgttttctcgacaaaggaaggtgttcagcaactagtgttgggt
ttgtatataataagaggcgacaacataagtatcgtcggagaattagatgaagaaatcgat
tcgtctgttgactggtcggaaaaaagagctcatcctctaaagcctgtcattcattga
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