Humulus lupulus (common hop): 133830219
Help
Entry
133830219 CDS
T11341
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
133830219
Enzymes [BR:
hlp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
133830219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
DUF8186_C
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
133830219
NCBI-ProteinID:
XP_062116132
LinkDB
All DBs
Position
4:25008678..25013260
Genome browser
AA seq
645 aa
AA seq
DB search
MAPLGVKLYVEDKHVMMDNGIVQVTLSNPDGIVTGIRYNGIDNLLEVRNDESNRGYWDLV
WNSPTTGIATGIFEVIRGTNFSVIVENEEQVEISFSRTWDSSMQGMLAPLNIDKRFILLR
GSSGFYSYAIYEHSKEWPGFNLGETRIAFKLRKDKFHYMAVADNRQRNMPLPDDRIPPRG
QALAYPEAVLLLNPIEPELKGEVDDKYQYSCENKDIKVHGWIAKESNVGFWLITPSYEYR
SGGPLKQNLTSHVGPTALAVFLSAHYTGDDLVPTFEEGEQWKKVFGPVFIYVNSLFDGSD
PLQLWEDAKIQLMIEEQSWPYSFPASEDYPKSLKRGNVSGRLLVKDRYINSDYIWANGAY
VGLAPPGEVGSWQRECKDYQFWSRADENGYFSIDDVREGDYNLYAWVPGFIGDYRYDIVL
TITSGCYIEMGDLVYEPPRNGPTLWEIGIPDRSAAEFYVPDPNPNFVNKLYVNHPDKFRQ
YGLWERYAQLYPDNDLVYTIGQSDYTKDWYFAQVTRKKEGSKASYQGTTWQIQFKLDEVD
KSTTYKLRIALASSTLSELQVRVNDPKLGNPLFSSGLIGRDNSIARHGIHGLYWLYHVSV
PATRLVQGDNTIFLTQPRSTAPFQGIMYDYIRLEGPPSPSPSPPS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcttggagtgaagttgtacgtagaagataagcatgtgatgatggacaatggg
atagtacaagttacactgtcaaacccagatggaatcgttactggaattcgatataatggc
atagacaatttgcttgaagttcgtaacgacgaatccaatagagggtactgggacctggtc
tggaactcaccgaccactggtatcgcaactggaatatttgaagtgataaggggtacgaat
ttcagtgtaattgtagaaaatgaggaacaagtggaaatttctttcagtagaacttgggat
tcgtcaatgcagggcatgcttgcgcccttaaatattgataagaggttcatactgctacga
ggttcatccggattttactcgtatgcgatttacgaacactcgaaggaatggcctggtttc
aaccttggtgaaacaagaattgcattcaagctcagaaaagacaagtttcactacatggcc
gtagcagacaacaggcaaagaaacatgcccctgcctgatgaccggataccacctagaggc
caagccctggcttatccagaggctgttttgcttctcaatcccatcgagcctgaattgaaa
ggagaggttgatgacaaatatcagtattcatgtgagaacaaggatatcaaggtccacggg
tggattgccaaggaatctaatgtgggcttttggcttatcacaccaagctatgagtaccga
tctggtgggcccctcaaacaaaacctcacttctcatgtcggcccaactgctcttgcggta
tttctaagtgctcattatacgggagatgatttggtgccaacatttgaagaaggagagcag
tggaagaaggttttcggtcctgtttttatctatgttaactctttatttgatggaagcgac
cctcttcaattgtgggaggacgctaaaatacagttgatgatagaagagcagagctggccc
tatagtttcccagcttcggaagattaccccaagtcactaaaacgtggtaatgttagtgga
agattacttgtaaaagacagatatattaacagtgactacatttgggcaaatggggcatat
gtggggttggctccaccaggagaggttggatcgtggcaacgagagtgcaaggattaccaa
ttctggagcagagcagatgaaaatggctacttctccatcgatgatgttcgtgaaggcgac
tataacctatacgcatgggtccctggtttcattggagattatcgttatgatatcgtcctt
accataacctctggttgctatattgagatgggggatttagtatatgagcctccaagaaat
ggaccaacattgtgggaaattggcattcctgaccgctctgctgcagagttttatgttcct
gatcctaatccaaacttcgtcaacaaactttatgtcaatcatcctgataagtttagacaa
tatggactttgggaaagatatgctcaactttatcctgataacgatttggtttacactatt
ggtcaaagtgactacaccaaagattggtattttgctcaggttaccaggaagaaagaaggt
agtaaagcatcatatcaaggtactacttggcaaatccaattcaagctcgatgaagtagac
aagagcactacctataagctaagaatagcattggcatcatctactctttctgaattacag
gttcgagtaaacgatccaaagctgggaaatcctctgttttcaagtggattaataggaaga
gacaattcaattgctagacatggaatccacggcctttactggctgtaccatgtgagcgta
ccagcaactaggcttgttcaaggagataatacaatctttttaacacagccaagaagcaca
gctccatttcaggggattatgtatgattatattcgcttagaagggcccccttctccttct
ccatctccaccttcatag
DBGET
integrated database retrieval system
