Humulus lupulus (common hop): 133830800
Help
Entry
133830800 CDS
T11341
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133830800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlp03021
]
133830800
03400 DNA repair and recombination proteins [BR:
hlp03400
]
133830800
Enzymes [BR:
hlp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133830800
Transcription machinery [BR:
hlp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
133830800
DNA repair and recombination proteins [BR:
hlp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
133830800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
133830800
NCBI-ProteinID:
XP_062116855
LinkDB
All DBs
Position
4:complement(126727535..126729022)
Genome browser
AA seq
331 aa
AA seq
DB search
MGQEKVIVSTRPLQWKCVESRADSKRLYYGRFILAPLMRGQADTIGIVMRRALLGEIEGT
CITRAKSDKIPHEYSNLVGIQESVHEILMNLKEIVLRSNLYRTREASICVKGPGCVTAQD
IILPSSVEIVDNTQHIANLTEPINLCIELQIERNCGYRIKMPKNFQNGSYPIDSIFMPIR
NANHSIHSYVNGNEKQDILFLEIWTNGSLTPKEALHEASRNLIDLLFPFLHAEEENFHFE
NNQHKGTLPLFDFHGRVAKLRKTKKEIALKYIFIDQSELPPRVYNCLKKSNIHTLLDLLN
NSQEDLLKIKDFRIEDIKHILDVLEIKKHFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagagaaagtaatagtatctactcggccactacagtggaaatgtgttgaatca
agagcagacagtaagcgtctttattatggacgctttattctggctccacttatgagaggc
caagccgatacaataggcattgtaatgcgaagagctttgcttggagaaatagaaggaaca
tgtatcacacgtgcaaaatccgataaaataccccacgaatattctaacctagtaggtatt
caagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatagaacgcgcgaggcgtcaatttgtgttaagggtcctggatgtgtaactgctcaagat
atcatcttaccatcttcggtggaaattgttgataatacacagcatatagctaacctaaca
gaaccaattaatttgtgtattgaattacaaattgagaggaattgcggatatcgtataaaa
atgccaaaaaactttcaaaacggaagttatcctatagattctatattcatgcctattcga
aatgcaaatcatagtattcattcttacgttaatggaaatgaaaaacaagatatacttttt
ctcgaaatatggacaaatggaagtttaactcctaaagaagcacttcatgaggcctccaga
aatttgattgatttattgtttccctttttacatgcagaagaagaaaacttccatttcgaa
aacaatcaacacaaaggcactttacccctttttgattttcatggtagagtggctaaactg
aggaaaacgaaaaaagaaatagcattgaaatatatttttattgaccaatcagaattgccc
cccagggtctataattgtctcaaaaagtccaatatccatacattattagaccttttgaat
aacagtcaagaagaccttctgaaaattaaagattttcgcatagaagatataaaacatata
ttggacgttctagaaataaaaaagcatttcgcataa
DBGET
integrated database retrieval system
