Humulus lupulus (common hop): 133831011
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Entry
133831011 CDS
T11341
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133831011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hlp04121
]
133831011
Enzymes [BR:
hlp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133831011
Ubiquitin system [BR:
hlp04121
]
Ubiquitin ligases (E3)
HECT type E3
133831011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TRIP12_N
HECT
ARM_ARMC5
DUF4636
UTP15_C
AIPR_N
Motif
Other DBs
NCBI-GeneID:
133831011
NCBI-ProteinID:
XP_062117153
LinkDB
All DBs
Position
4:182906518..182924501
Genome browser
AA seq
1562 aa
AA seq
DB search
MGNRGQKRTETVEELPADKRVCNSLEFRPSSSNSSVQTHMNSTNSTAETGEHDMDTSSSA
SASSRSEGEPEKDSTYGSCDSDDAEQRHSELRDYQRRRSSGDHGKFKRILSVLSEETEES
GQLVVLTELCEVLSFCTENSLSSMTSDSLSPYLVRLSRHETNPEIMLLAIRAITYLCDVY
PRSSGFLVRHDAVPALCQRLLAIEYLDVAEQCLQALEKISREQPLACLQAGAIMAVLSFI
DFFSTSMQRVALSTVMNICKKLPSECPSPFMEAVPILCNLLQYEDKQLVEIVALCLIRIT
ERVRKSSEMLDELCKHGLIQQTTHFINSSSRTTLSLPVYNGLLGVLVKLSSGSVVAFKTL
FELNISSILKDALSNYDISHGVSSPRTADGQGNQVYEVLNLINALLPTSTRDQDAPELLD
KESFLKHQPDLLKNFGMDVLPLLIQVVNSGANLYISFGCLFVINKLIHLSPADVLVEVLK
NANFSSFLAGVFTRKDPHILILALKIAELVLQKLSDIFLDSFIKEGVLFAIDALLKSEKC
PDLNPDKYSQLMVPVFCSTQFSSDSSQKSVSRESLTCLCYTFASGSAAPTVESNNCKLEK
DSVYNLAKHIRTSYFSADLFDSDKTLTDVLQELKSFSLALNDLSNISMNNEAFDHHEERF
YDILCQVITKLSGSEPISTFEFIESGIVKSLINYLSDGQYLSEERECCVNHCNIDAMEKR
FAAFAKVYLLSSDSFSQDFPLSTFILKLQNGLSSLEAFPVVLNNAKMRSSFAAVPSGRCI
MYPSLTVRFVRGEGETGLSDYTEDYLTADPFSSVDAIEGFLWPKVKSEVTKPLMQASGQI
EKLPLQSLAAASSSPDGRLDDRGSDSMLTDLTKTQEIHASLSQAAHEQTVNSSEATPGAM
SQESAEEGQFYPKADIDMEREFSASSSSTDTLPNLLFFLDGQLLERDLTLYQAIIQKQIR
EHETVASTRLWSQVYTLTYKKSANKPYNIKECSCSVKKCGLSDAIKKYVQQTSFSSSMFT
SDLASDLEKPSPTYDIMYLLKCLERMNRFRFHLISQERMGAFAEGKLHDLDRLKISAVPS
VPQNEFVSSKLTEKLEQQMRDRMAVSIGGMPSWCSQIMASCPFLFSFEARCKYFRLGAFG
QLPLSHSDSGMAIDRRLRSGGFSRKKFLVSRDSILESAKQMMELHARYKGLLEVAFNDEV
GTGIGPTLEFFTLVSHEFQKTGLGMWRDDHGFTSNTSLQLENQEFVMCPLGLFPRPWSSS
KDVSDGIQISGVMKNFELLGQIVAKALHNGRVLDLHFSKAFYKLILGQELGMFDILSFDP
ELGRTLLEFKALAERKLFLESTGGDVSTFKFDTCFRNTRIEDLSLNFTLPGYPDFFLASG
PDYDTVTMRNLEKYVSLVVDATLSDGISRQTEAFKLGFNQVFPLEQLQIFTEEELERLLC
GEHNSWAADELIDQVKFDHGYTASSPPVVYLLEIIQEFDKKQQRAFLQFVTGAPRLPPGG
LASLNPKLTIVRKHCSGCVDADLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFH
LS
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgtgggcaaaagcgtacagaaacagtggaagaattgccggccgataagcga
gtctgcaattctcttgagttcagaccgagttcatcaaactcatcggttcaaactcatatg
aattctactaactcaactgctgaaaccggtgaacatgatatggatacctcatcttctgct
tcggcctctagccggtctgagggagaacccgaaaaggattcaacgtatgggtcttgtgat
tctgatgacgcagagcaaagacactctgagcttagagactaccagaggcggcgatcttct
ggtgatcatggaaaatttaagaggatcttatcagttctgagtgaagaaacagaggagtct
gggcagttagtcgtgcttactgagctatgtgaagtgctgtcattttgtacagagaattca
ctttctagcatgacgtctgactccctatctccttatcttgtaaggctctcaagacacgag
actaacccagaaattatgctattggctataagagctataacttatctatgtgatgtttat
ccccgatcgtcgggttttctggtccgacatgatgcggttcctgctctttgtcaaagatta
ctggcaattgaatacttggatgtggcagagcagtgtctgcaagcattggagaaaatatcg
cgcgagcaaccacttgcttgtctgcaggctggtgcaataatggctgtcctcagttttatc
gatttcttctcaacaagcatgcagagagttgctctttccactgtgatgaacatatgtaag
aagcttccttctgaatgtccctcaccttttatggaggctgtcccgatattatgcaatctt
cttcagtatgaagataagcagcttgttgaaattgtggctctctgcttgattagaattaca
gagcgagttaggaagtcttctgagatgctggatgaactttgtaagcatgggttaattcag
cagaccacccattttataaactcaagtagccgaactactctgtcactaccagtttataat
gggttgctaggggtgctagtcaaactttcctctggctcagttgtagcattcaagactttg
tttgagcttaatataagtagcatattgaaggatgccctgtctaattatgatatctcacat
ggagtttcttctcctcgtacagctgatgggcagggaaatcaggtatatgaagtgctaaac
ttaataaatgcgcttcttcctacttcaaccagagatcaagatgcaccagaattgttggat
aaagaatcttttcttaaacaccagcctgaccttttgaaaaattttgggatggatgttctt
cccttgttgatccaggtggttaattctggggcaaatttatatatttcctttggctgcctt
tttgtaatcaacaagttgattcatttgagcccagctgatgtgcttgttgaagtgctcaag
aatgccaacttttcgagtttcttggctggtgtatttactagaaaggatcctcatattttg
atcttggccctgaagatagctgaattggttctacaaaagctttcagatattttcttggac
tctttcataaaagaaggtgttctttttgccattgatgccctgttaaaatcagaaaagtgt
ccagatttaaacccagataaatattcacagttgatggtccctgtgttttgttcaacacag
ttctcatctgattcgagtcaaaagtctgtttccagggagtctcttacatgcttatgttac
acttttgcttctggtagtgcagctccaacagtggaaagtaataactgtaagcttgaaaag
gattctgtttacaatcttgctaagcatataagaacaagttacttctcagctgatttattt
gactctgataaaacattaactgatgttcttcaagagctcaaaagtttttctttggcatta
aatgatttgtcgaacatctccatgaacaatgaagcctttgatcatcacgaggagaggttc
tatgatatattgtgtcaagtgatcacaaagcttagtggaagtgagcccatctccacattt
gagttcattgaaagtggaattgtcaaatcattgattaattacctgtcagatggccagtat
ttgagtgaagaaagagagtgctgtgttaatcactgtaatattgatgccatggagaaaaga
tttgcagcatttgcaaaagtgtatttgctttcatcagactcattttctcaagattttccc
ctatcaaccttcatacttaaattacaaaatggactatcttctttggaagcattccctgtt
gttttgaataatgccaagatgaggagctcgtttgctgctgttccaagtggacgttgcata
atgtatccatctctaacagttcgttttgtaagaggtgaaggagagacaggccttagtgac
tacactgaagactatctgacagctgaccccttttcctcagtggatgccattgaagggttt
ctgtggcctaaagtcaagagtgaagtgacgaagccattgatgcaagcttcgggccaaata
gaaaaactaccacttcaatcattagcagctgcaagttctagcccagatggacgtctggat
gacaggggatcagacagcatgttgacagatttgactaagacgcaggagattcatgcttct
ttgtcacaggctgcccatgaacaaacggtcaattctagcgaggcaactcctggagcaatg
tctcaggaatctgcagaggaaggacagttttatccaaaggcagatattgatatggaaagg
gaattctctgcatctagtagtagtacagatactttgcccaacctgttatttttccttgac
gggcaactgctagagcgggacttgacattataccaggcaattattcaaaaacaaattaga
gagcatgaaactgttgccagcacgagattgtggagtcaagtttacaccttaacatacaaa
aaatctgcaaataaaccttataatattaaggaatgctcttgttcagttaaaaagtgtggt
ctatctgatgcaatcaagaagtacgtgcagcaaacttcattttcctccagcatgttcact
tctgatcttgcttctgacttggagaaaccaagccctacttatgatataatgtatctgctg
aaatgcttggaaaggatgaacaggtttcgtttccatctgatatctcaagaaagaatgggt
gcttttgctgaaggaaaacttcatgatttagataggttaaagatatcagcagtaccttca
gtgccgcagaatgagtttgtaagtagtaagctaacagaaaaactagaacagcagatgcgt
gaccgaatggctgtgtccattggtggtatgccttcatggtgcagtcagataatggcttcg
tgcccctttctatttagttttgaggcaagatgcaagtactttcgtttgggagcatttggt
cagttgccactatctcatagtgattcaggcatggcaattgacaggcgactaagatctggt
ggtttttctcgtaaaaagtttttggtttctcgtgatagcattctggaatctgctaaacaa
atgatggaactgcatgcccgctataagggactactcgaggtagcatttaatgatgaagtt
ggtactggtattggtccaacattggaattctttaccttggtcagccatgaatttcaaaag
actggattgggcatgtggagagatgatcatggatttacttctaatactagtttgcagctt
gagaatcaagagtttgtgatgtgccctttgggtctatttcctcgcccatggtcatcttct
aaagatgtctctgatgggattcaaattagtggcgtgatgaaaaactttgaactcctgggg
caaattgtagcaaaagctcttcataacggacgagttttggatcttcacttctcaaaagcc
ttctataagcttattcttggacaggaacttggtatgtttgatatcctgtcatttgatcct
gagcttggaaggacattgctagagttcaaggctcttgcagagaggaaactctttctggaa
tccactggtggagacgtttccacgtttaagtttgatacgtgcttccggaatacaagaatt
gaggatctttccctcaattttactcttcccgggtatcctgatttttttcttgcttctgga
cctgattatgacactgtaactatgagaaacttggagaagtatgtttcacttgttgtagat
gcaactttaagtgatggaatatcaagacaaacggaagcatttaaattagggtttaatcag
gttttccctctagagcaacttcagatctttactgaagaggaattggaacgcttactatgc
ggagaacacaattcttgggctgctgacgagctcattgatcaagtgaagtttgatcatgga
tacactgctagcagtcctcctgtagtttatttgctagagattatacaagagttcgacaag
aaacagcaacgagcattcttgcaatttgtgactggagcacctcgtttacctccaggaggt
ttggcttctcttaatccaaagttgactatcgttcgaaagcattgtagcggctgtgtagat
gcagacctcccaagtgtcatgacatgtgccaactatcttaaactgccaccctactcgtca
aaagagaggatgaaagagaagctattgtatgcaataacagaaggacaaggatccttccat
ctttcgtag
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integrated database retrieval system
