Humulus lupulus (common hop): 133831058
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Entry
133831058 CDS
T11341
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133831058
Enzymes [BR:
hlp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133831058
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
90S particles
Helicases
133831058
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
133831058
NCBI-ProteinID:
XP_062117209
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All DBs
Position
4:189749859..189754844
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AA seq
542 aa
AA seq
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MEKGTSFLFAGIHFNKKKFSRDFSRFQEKRENDELVENLSLNENRELEEDEEEKVEEKVR
VKKRKRKAVGSGPSESVEGFNIFKSSKSVEAIVKEENEKTEKKLSQEKKKFYQQQERDAL
FRKEHNIHVSGNNIPSPLTDFAELSSRYGCEAKLLRNLAELGIKEPTPIQRQAIPILLSG
RECFACAPTGSGKTLAFVCPMLMKLKPASKDGVGAVILCPTRELASQTIRECKKFAEGSK
FRIKLMTKQLIRKADLSKFSCDILVSTPLRLKLAIRKKKLNLSRVQYLVLDESDKLFELG
LLKQIDCIVKACSNPSIVRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASENVKQKL
VFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELLVDNIRVDVIHSDLTQEQ
RDSAVDNFRAGKTWVLIATDVIARGMDFKAINCVINYDFPDSTSAYIHRIGRSGRAGRSG
QAITLYTEEDIPFLRNIANEMKSSGSVFPSWALGLQKKKWKKHRPRRDTISTTPQDKGEK
KK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcacttcttttttgttcgctggaatccattttaataagaagaaattctcc
agagacttttccagattccaggagaagagggaaaatgatgaattggttgagaatttgagc
ttgaacgaaaatagagaattagaagaagatgaagaagagaaagtagaggagaaagtacgt
gtgaagaagaggaagagaaaggcagttggttctggaccttctgaatctgtggagggattc
aacattttcaagagttcaaaatcagttgaagctatcgtgaaagaagagaatgagaaaact
gagaaaaaactctcccaagagaaaaagaaattttatcagcaacaagagcgggatgcactt
ttcaggaaggagcataacatccacgtttctgggaataatatcccatctccacttacagat
ttcgcagagttaagctcgagatatggatgtgaggcgaaattattacgtaatttggcagaa
cttggaattaaagagccaacaccaatccaaaggcaggctataccaatcctcttatctgga
cgggaatgctttgcctgtgctccaactgggtctggcaaaaccttggcttttgtttgtccc
atgcttatgaaacttaagcctgcttctaaagatggtgttggagctgtaatactttgccct
acacgtgaattggcatctcaaacaattagagagtgtaaaaagtttgccgagggaagtaaa
tttcgtataaagctgatgactaaacagcttatacgaaaagctgacttatcaaagttctct
tgtgatatactagtatccactccacttcggttaaagttggctattcgaaagaaaaagttg
aatttaagcagggttcaatatcttgtattggatgaatctgataagctatttgagcttggc
ttgctaaagcagattgattgcatagtcaaagcatgctcaaatccttcaatagtacgctca
ttgtttagtgctactttacctgattttgtcgaggagcttgcacgtacaataatgcatgat
gctgttcgagttattattggcagaaagaatacggcttccgaaaatgtcaagcaaaagttg
gtttttgctggaagtgaagaagggaaacttttagcacttcgtcaaagctttgcagagagt
ctgaatccgcctgtgttaatcttcgtccaaagcaaggacagagctaaggaactgtatgga
gaactgttagttgacaacattagagttgatgtcatccattctgatctgacacaggaacag
cgagacagtgctgttgataacttcagagctggcaaaacatgggttttaatcgccactgat
gttattgcccgaggtatggatttcaaagcaatcaactgcgtgatcaattatgattttcca
gattctacttctgcatacattcacaggattggtcgatctggccgagcaggaaggagtggg
caagccattactttatacacagaggaggacattccatttttgcgaaacatagccaacgag
atgaaaagctctggctctgtgtttccatcttgggctcttggcttgcagaaaaagaagtgg
aagaaacaccggcctcgaagagatacaatctcaacaacccctcaagataagggagaaaaa
aagaaataa
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