Humulus lupulus (common hop): 133831457
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Entry
133831457 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133831457
KO
K14794
ribosomal RNA-processing protein 12
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133831457
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
90S particles
Other 90S particles
133831457
Pre-60S particles
Other pre-60S particles
133831457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
TOR1L1_N
HEAT_ECM29
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
133831457
NCBI-ProteinID:
XP_062117740
LinkDB
All DBs
Position
4:242547954..242558092
Genome browser
AA seq
1189 aa
AA seq
DB search
MEDDKPEQDQEPDHDHTDSFNDASDICQQLMDRYAKSTAAQHRHLLATAAAMRSLLTAES
LPLTPPAYFAAAITAIDDASSASSQSLDPTAVAALLAFLAIVLPLVPPQMIEAEKASEAV
QVIVRLLAWEKEGLAVATVRAGVKCLGVLVGFCDLEDWVSVKLGFETLLKFSVDKRPKVR
RCSQECLEKVFKSIHSSTVIKEASKLVMSMLKSYMPLAVELSNSRGSVGSKDDLLTEPKN
VEVLHMLNMLKLIVPFLSIKTRSKVLSEVEKLMKRQFSLLTRHILKTIETCFDTVKADVI
APSTENIVVSLSSYISLGEKNPADTVKSAITLLKRSLDILRSGEASSYIKCLSLVCDSVA
GLLTFEDSIASHAALILKEVISHHVDQRSPSDDDTQSFQDDGKESIEATAIKSTCAILEN
SLMICDGKPNEHILAVTSALFLKLGGISCYYMKNILFKLADLMTLASGGKFNTVHIQSCI
GSAVIAMGPEKILSYVPISLNTDDFTYSNIWLVPILKKYVVGASLEYYIDNVIPLAKSFQ
QASRKAKDPTIGQSLQSRAYDLWGLLPSFCQHPTDFCQNVGPLAEVLIKFLKKNSYMHEN
VAVALQVIVNQNKSALSQKTDAAVSEPGVSLESVSKFSCPPTYSKKVATKNLKTLASYSN
KLVRALTDLFLESPPEKRSFFKDAIGCLTSITDPSVTKKIFKSLLEQFGFIDERGEFGKP
ESENESTLVDKEPGNLDTMEKDAQRCFVLELASCFVEGAKEDLIDLIYNFIKSSFQVTNE
IGHHQAYHTLSRILREHAWFSSSRFSELIDFLLGFKSSTDVATLRSRFACFHPLMVHTLK
IDSEEENAKAFLIVNEIILTLKDAKEEDVRKAAYDVLLEIGSSLRDMASFTSESSDTPYQ
KLINMVMGYLSGTSPHVKSGAVSVLSVLIYKDTEIYRSMPDLIPSILTLLQGKSVEVIKA
VLGFVKVLVSCLEGRDLQHLLPDILKEVLPWSSVSRNHFRSKVTVIVEIMIRKCGFSSVT
SVAPEKYRRFLKTVMENRHAKTNLKDEAEPITDKETQHSTKRQGKRDRNELDTEPKKNEK
AVKGRFDRSKKFNKGKFDQVPPSGQKRKFDQGPPSGQKRKFDQQGPPSGQKRKFDQGPPR
GQKRKFDQGPSSGQKRNMNMGKKGGFKKAAPGSMPKRSKFGKSGDRKQV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgataaacccgaacaagaccaagagcccgatcacgatcacactgactcattc
aacgatgcctctgacatttgccagcagctcatggaccgctacgccaagtccacggccgcc
cagcaccgccacctcctcgccactgccgctgccatgcgctccctcctcaccgccgaatcc
cttcccctcactccaccggcttactttgccgctgccattactgccattgatgacgcctcg
tctgcttcctcccagtccttggaccccacagccgtcgccgcgcttctagcttttctcgcg
atagttctcccgcttgtgccgccacagatgattgaggccgagaaggcgagcgaggccgtg
caggtgattgtgaggctcctggcgtgggagaaggaagggctcgctgtggccaccgtgagg
gctggagttaagtgcttgggggttttggtaggtttttgtgatttggaggattgggtctct
gtgaaattgggatttgaaacgttgctcaaattctccgttgataaacgccctaaggtaaga
agatgttcgcaagaatgtcttgagaaggtttttaagtcaatacatagttctactgttatc
aaggaagcgagcaaactggtgatgtctatgctaaaatcttacatgcctttggctgttgaa
ttaagtaattcaaggggttctgttggatctaaagatgatttgttgacagaacctaaaaat
gtggaggtcctccacatgctaaatatgttgaagcttattgttccttttctttccattaaa
acaaggtcaaaagttctttcagaagtagagaaactcatgaaacgtcagttctcattgctc
acaaggcacattctcaaaaccatcgaaacatgttttgacactgtgaaagctgatgttatc
gcacccagcactgagaacattgtggtttctctttcatcatatatctctttgggagagaag
aatcctgcggatactgtgaagtctgccataaccttgttgaaacgttctcttgacatactt
cgttctggagaagcaagctcttatattaagtgtctttcgctagtttgtgattctgttgca
ggacttctgacttttgaagattcaattgcatcgcatgctgcactcatattgaaagaggta
ataagtcatcatgtggaccaaagaagcccgtcggatgatgatactcaatcatttcaagat
gatggaaaggagagcattgaagcaactgcaataaaatccacatgtgctatcttggaaaat
tctcttatgatttgtgatggaaaacccaatgagcatattttggctgtcacatctgcattg
ttccttaaacttggagggatctcatgttactatatgaaaaatattctgttcaaacttgcc
gacttgatgacccttgctagtgggggtaaattcaacactgttcatattcagagctgtatc
ggatccgcagtaattgctatgggacctgagaaaatattatcatatgtgcctatatccctt
aacactgatgatttcacctattcaaatatttggttggtgccaattctgaaaaaatatgta
gttggagcgtcattggagtattacatagataatgtcattccccttgcaaaatcctttcag
caagccagtcgtaaagctaaagacccaacaattggtcagagtttacaatcgcgtgcttat
gacttgtggggattgcttccttctttttgccagcatccaactgatttttgccaaaatgtt
ggacctctggctgaagttttaattaagtttctcaaaaagaattcttatatgcatgagaat
gttgctgttgctttacaggttatagtaaatcagaacaaaagtgcactcagccaaaaaact
gatgctgctgtgtcagagcccggtgtgtcattagaatctgtttcaaagttcagctgccca
ccaacttattcaaagaaagttgcaacaaaaaatttgaagactttagcatcatattccaat
aagttggttcgggctctaacagacttgtttcttgagtcacctcctgaaaagcgctcattt
tttaaggatgctattggatgcttgacttctattactgatccttctgtaaccaaaaagatt
ttcaagtccttgcttgagcagtttgggttcattgatgaaaggggcgagtttggaaaaccg
gagtcagagaatgaaagcacattggttgacaaagaaccagggaatctagacaccatggag
aaagatgctcaaagatgttttgttctagagcttgcgtcttgttttgttgaaggagccaaa
gaggaccttattgatctaatctataactttattaagagcagctttcaggtcaccaatgag
attggtcatcatcaagcctatcacactctgagtagaattttgcgggagcatgcttggttt
agttcgtctcgattttctgagctgattgatttcttactaggctttaaatcttctactgat
gttgctactctaaggagtcgctttgcttgttttcatcctttaatggttcacacattgaag
atagactcagaggaagaaaatgcaaaggcttttctcattgtcaatgagatcatacttaca
ctaaaggatgccaaggaagaggacgtaaggaaagcagcctatgatgtactacttgagata
ggttccagcttgagagacatggcatctttcacttctgaatcttctgatacaccttaccag
aaactaattaacatggtaatgggctatctttctggtacatctcctcatgtaaagagtgga
gctgtgtctgtgctatcagtgctgatatacaaggatacagagatttaccgctcaatgccg
gatcttattccctctattttaactttgctgcagggcaaatctgtcgaagttataaaagct
gttttgggttttgtgaaagtactagtatcttgcttagagggtagggatttgcagcatctt
cttcctgacattctcaaagaagttttaccatggtcttctgtttcaagaaaccatttcaga
tcgaaggttactgtcatagtagagattatgatccggaagtgtgggttttcttcagttaca
tcagttgctccggagaaatataggcgctttctgaagactgtaatggagaatcgccatgcc
aagacaaatctcaaagatgaggctgaacccatcactgataaagaaacacaacattctacc
aagaggcaggggaagagggatcggaatgagttggatacagaacctaagaaaaatgaaaaa
gcagtgaaaggtcgatttgataggagtaaaaaatttaataaaggaaaatttgatcaagtt
cctccaagtggtcaaaagagaaaatttgatcaaggccccccaagtggtcaaaagagaaaa
tttgatcaacaaggacccccaagtggtcagaagagaaaattcgatcaagggcctccaaga
ggtcaaaagagaaaatttgatcaagggccttcaagtggccaaaagagaaatatgaacatg
ggcaagaaaggaggttttaaaaaagcagcccctggttccatgcccaaacgaagcaagttt
gggaaaagtggagataggaaacaagtatag
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