Humulus lupulus (common hop): 133831501
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Entry
133831501 CDS
T11341
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133831501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133831501
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133831501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_1
TPR_12
Motif
Other DBs
NCBI-GeneID:
133831501
NCBI-ProteinID:
XP_062117817
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All DBs
Position
4:complement(244693398..244701175)
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AA seq
863 aa
AA seq
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MANDQDMSSWTDLLHSSSKLLEQAAPSVQFPPLQRNLDQLETLSKKLKAKTLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATTVEEYLQQVHEMAIISAVQEA
QKDNLRSFNDYMLKVLEEDWQKEKRDSLQSLSRISTLPRTNMIVSSSGGARSGQIVSMTS
SPQASSGASSMQLVPLANKPILEKKAAVYAEVVKNLNDARERGLPFKPATAFKGAYESLG
LDASGGKSVHFQKIWHLIQALTGEDSSVPKSVSKKMSLIIGARRHLERGHEKYVMDTIQS
HPAQAALGGVVGNMQRIRAFLRIRLRDYGVLDFDAGDSRRQPPIDTTWQQIYFCLRTGYY
DEARNVALQSRSSHQFAPLLTEWINTGGMVPAEVAAAASEECDKMLRMGDRMSRAAYDKK
KLLLYAIISGSRKHIDRLLRDLPTLFNTIEDFLWFKLSAVRDCPVGPPSVVISDNLVPYT
LDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLIPAVLYLSKEAGDEGYNIDAAHIS
IVLADNGILSEGVGGGQKMGVMDANAEASSLIRQYGALYLRLGNLPMALEYYAQAAAAVG
GGQLSWSGRGTVDQRRQKNLMLKQLLTELLLKDSGIYLLLGTRGAGEEGQLSRFLNDENS
RKQFLLEAAHQCQEAGFYDKSIEIQKRIGAFSMALDTINKCLSEAICAISRGRLDGESRT
SGLIHSGNEIMEAYKYHPEVSPQERENVTEQQMVLRQLEAILSVHKLVKVGHYIDALREV
ARLPFLPLDPRTPDIAADVFQNLSPHVQACVPDLLRVALTCLDNVTDSDGSLRALRAKIA
SFIATNSSRNWPRDLYEKIARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaagacatgagtagctggaccgatctcctccactcctcctctaagctt
ctcgagcaagctgctccttcagttcaattccctccacttcagagaaatttggatcagtta
gaaacattgtctaagaagcttaaggcaaaaactttaagaactgaggctccatctcaatcg
attgctgccacaaggctgcttgctcgagagggaataaatgcagagcagcttgcgcgagat
ttgaagtcttttgaattgaaaacaacatttgaggatgttttccctgcggaggcaacaact
gttgaggaatatctgcagcaggtccatgaaatggcaattatttcagctgtccaagaagct
caaaaggataacctcagaagttttaatgattacatgttgaaagtgttggaggaggattgg
caaaaagaaaaacgggatagtcttcaaagcttgagtcgaatttccacattacctagaact
aacatgatagttagcagtagtgggggtgctcgctctggacagatagtgtcgatgacttct
agccctcaagcttcatctggtgcatctagcatgcagcttgtacctcttgctaacaagcct
atccttgagaaaaaggcagctgtctatgctgaagttgtaaagaatctgaatgatgcaaga
gaacgtggcttaccatttaaacctgcgacagcttttaagggtgcttatgaaagtttaggt
ctggatgcgtctggtggaaaatccgttcattttcagaagatttggcaccttattcaggca
ttaactggtgaagactcatctgttccaaaaagcgtgtcaaaaaagatgtctttaattatt
ggtgcaaggcgccatcttgagcggggtcatgaaaaatatgtaatggataccatccaaagt
catcctgcccaggctgcacttggtggggttgttggaaacatgcaaagaattcgtgcattc
ctccggattcgtttgagggactatggagttctagattttgatgctggtgattctcgaagg
cagcctcctattgatacaacttggcagcagatatacttttgcctgagaactgggtattat
gatgaagcaagaaatgttgctctccagtcccgttcttcacaccagtttgctcctctgctt
acagaatggatcaacactgggggtatggtgcctgcagaagttgcagctgctgcctcagaa
gaatgtgacaaaatgttaagaatgggtgatcgcatgagtcgagcagcatatgacaagaaa
aagctgttgttatatgctatcatatctgggtcacgcaagcacattgatcgattgttgaga
gatttacctacacttttcaataccatagaggacttcctgtggtttaaattgtcagctgtc
cgggactgtcctgttggtcccccatcagttgttataagtgacaacttggttccatacact
ctggatgatttgcaggtttacctaaacaagtttgatccctcatattataccaaaaatgga
aaggaccccctagtatacccatatgttttgcttttaagcattcagttgataccagctgtc
ctatacttgtctaaggaagcaggagatgaaggttataatattgatgctgcacacatatca
attgtgctggccgacaatggaatcctttctgaaggtgttgggggtggacaaaaaatgggg
gtgatggatgctaatgcagaggcatccagcttgattagacagtatggtgctttgtatctt
cgccttggtaatcttccaatggcattagaatattatgcccaagctgctgcagcagttggt
ggtgggcagttgtcatggtctgggaggggtactgtagatcaacgaagacagaaaaacttg
atgctaaaacaactcctaacagagctgttgttgaaagatagtgggatctatctgctactt
ggtacaagaggtgcgggagaagaaggtcaattgagccggtttttgaacgatgagaattcg
agaaagcaatttttacttgaagctgctcaccagtgtcaggaagctggattctatgacaag
tctattgaaattcaaaaaagaattggggcattctcaatggcattggatacaattaacaag
tgtctctctgaagcaatatgtgccatctcacgtggtagattggatggtgaaagtcggacc
tctggcctcattcattctggaaatgagatcatggaggcatacaaatatcaccctgaagtc
agtcctcaagaaagagagaatgttacagaacagcagatggtgttaagacaacttgaggca
atactctcagttcacaagttggttaaagtgggtcactatattgatgctctaagggaggtt
gcaagacttccatttcttcctctggatccaagaactccagatattgcagctgatgtgttt
cagaacttatctcctcatgtccaagcttgtgttccagaccttctcagagttgcccttact
tgtctggataatgtgacagattctgatggatcgctccgggccttgagggcaaagattgca
tcttttattgcgactaattcgagcaggaattggcctcgcgacttgtatgaaaagattgca
agaagcttatga
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