Humulus lupulus (common hop): 133831512
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Entry
133831512 CDS
T11341
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133831512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hlp03036
]
133831512
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
133831512
INO80 complex (yeast)
133831512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
133831512
NCBI-ProteinID:
XP_062117835
LinkDB
All DBs
Position
4:complement(245023560..245033943)
Genome browser
AA seq
1540 aa
AA seq
DB search
MDHRKQSKDSPSYSDLFNLETLMSFQLPEPHDIFDYYENSSQDESRGSRGGAVANKGNGL
MSERELSSLKKRRRSQNGDYEDEDSYYNRNITEERYRSMLGDHIQKYKRRLKDSSASPAP
PRMGVPAPKSNVGLKARKLKNDQRGGFLESETTPEWHNYANHPKPGNYHEADFTPQNGSD
RATYEPPYLEIGDGITYRIPPTYDKLAASLNLPSFSDIRVDEIYLEGTLDLGSLAEMMAT
DKRFGPTNRAGMGEPHPQYDSLHSKLKSLAASNSAQNFSLKVSDVGLHSSIPDGAAGNIK
RSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPSVIEREEMEKIGKVWVNIV
RRDMPKHHRNFTAFHRKQLIDAKRVSENCQREVKLKVSRSLKLMKGAPIRTRKIARDMLL
FWKRVDKEMAELRKKEEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSST
QPSETTLMGDEETNEQEEHIISVDAGMVEEDDPEEAELKKEALKAAQDAVSKQKKLTSAF
DNECMKLRQTSEPEAPQEVAGASNIDLLHPSTMPVTSTVQTPLLFRGTLKEYQLKGLQWL
VNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEDKNIWGPFLVVAPASVLNNWADEITRF
CPDLKTLPYWGGLQDRTVLRKKINPKTLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYM
VLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQF
NEWFSKGIESHAEHGGTLNEHQLNRLHSILKPFMLRRVKTDVVSELTRKTEITVHCKLSS
RQQAFYRAIKNKISLSELFDNNRGQLNDKKLLNLMNIVIQLRKVCNHPELFERSEGSTYL
YFGEIPIALLPAPFGELEDVHYSGGRNPIIFKIPKLVHKEFIQKYDTSNSAQCSVRREFL
EKYFNIYSPENVYQSIFTNENSSNSSLKSGTFGFTRLTDLCPAEVGFLGTSSFMERLLFS
LTRWDRQFLDEMIDLFMETNHDDSEVNYLESGKVRAVTRMLLTPSKSVTNFLQKKFATGP
GDTPFEALVVSHEDRLLSNIRLLHSTYTVIPKTRAPPVDAHCSDRNFAYKMTDEQHSPWI
KRLLVGFARTSEFNGPRKPNAPHHLIQEIDSELPISQPALQLTYNIFGSSPPMQSFDPAK
LLTDSGKLQTLDILLKRLRANNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMD
RRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ
TKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQLE
QKLKEIPLQQAKDRQKKKQTKGIRVDAEGDASLEDLANNVPEAAGHEDSPDPEKTKPTNK
KRKPVQTSKSRNAQMTDELNTMSMDFGLDDAQQNTDSLATKSKRPKRPKKSVNDNLEPAF
VVTSAVPEQSQYPSSLQTISSSSAVPQTGEDFSTHGNSFT
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggaccaccggaagcaatccaaggactcaccctcgtactcggaccttttcaatcttgag
actttgatgagctttcaacttccagaaccacatgacatctttgattattatgagaacagt
agtcaggatgagagtagaggaagccgaggtggggcagttgcaaacaaaggtaatggactg
atgtctgaaagggaattaagctcattgaagaagagaaggcggtctcagaacggtgactac
gaggacgaggacagttactacaacagaaacattacagaggagagatatagatcaatgctt
ggagatcacattcagaagtacaagaggaggctcaaggactcctcggccagtcctgcccca
cccaggatgggagtcccagctccgaagagtaatgtgggtttgaaagctaggaaattgaag
aatgatcaacgaggagggtttcttgaatcggaaaccacacctgagtggcacaattatgct
aatcatcccaaaccagggaattaccatgaagcagattttacaccacaaaatggctctgat
agagcaacatatgagcctccttatttggagattggggatggtatcacgtacaggatccct
ccaacttatgacaagctggcggcatctttgaacttgccaagcttttctgatattcgagtg
gatgaaatttacttagaaggtacattggatttagggtcactagcagaaatgatggcgact
gataaaaggtttgggcctacaaaccgggcagggatgggggagccccatccccagtatgat
tcacttcattcaaaattgaagtcgcttgctgcttctaactcagctcagaatttcagtctc
aaagtttctgatgttgggttgcattcttccatccccgacggggcagccggaaatataaaa
cggtctattttgtctgagggtggtgttttacaggtctactatgttaaagttctagagaaa
ggcgatacatatgagataattgaaagaagcttgcctaaaaagcaaaaggtgaagaaagat
ccttctgtgattgagagggaggaaatggagaaaattggaaaagtatgggtcaatattgta
agaagagacatgccaaagcatcataggaattttacagcttttcataggaagcaactaatt
gatgccaagagggtttcagaaaattgtcaaagagaggtgaaattgaaagtgagtagatca
cttaaattgatgaagggtgctccgattcgcacaaggaagatagctagggacatgctgctt
ttctggaagagagtggataaggagatggcagaattgaggaaaaaggaggaaagagaagct
gctgaagccctaaggcgtgagcaggagcttcgagaagcaaagaggcaacaacaaaggctg
aattttcttattcaacaaactgagctatacagccacttcatgcagaacaagtcgagcact
cagccatctgaaactacacttatgggggatgaggaaaccaatgaacaagaagagcatatt
atctctgttgatgcagggatggttgaggaagatgatcctgaagaggctgaactaaagaaa
gaggccttgaaagctgcgcaagatgcagtttctaagcagaaaaaactgacaagtgcattt
gataatgaatgtatgaagctgcggcaaactagtgaacctgaggctccacaggaggttgca
ggagctagtaacatagatctactccatccttccaccatgccagtgacatcaactgttcaa
acaccactgttgtttagaggcacccttaaagaatatcagctgaaaggtcttcagtggctg
gtcaattgttatgagcagggtttgaatggcattcttgctgatgagatgggccttggaaag
accattcaggctatggcatttttggctcatctagcggaagataaaaatatatggggacct
tttcttgttgttgctcctgcatctgtattgaacaactgggcagatgaaattacccgcttt
tgccctgacttgaaaactcttccatattggggtgggcttcaggaccgtacagttctgagg
aaaaaaatcaacccgaagacactataccgcagggatgctgggtttcacattcttatcacc
agctatcagctacttgtttctgatgagaagtactttcggcgggtgaaatggcaatatatg
gtgttggatgaagcccaagcaattaaaagttcaaacagtataagatggaagacactgctt
agttttaattgccgaaataggcttctgcttactggaactccaatccaaaataatatggca
gagttgtgggccttactacatttcattatgccaaccttatttgatagtcacgaacagttt
aatgagtggttttctaaaggaattgagagccatgcagaacatggtggtactttgaatgag
caccagcttaaccgattgcattcaatattaaaacctttcatgctacgtcgagttaaaaca
gatgtagtttcagagcttaccaggaaaacagagatcacagtgcactgcaaattgagttca
cgacaacaagctttttatcgagctatcaagaacaagatttctctttccgagttatttgac
aacaatcgtggacaacttaatgacaaaaaactccttaatttaatgaatattgtcattcag
ctaaggaaggtctgtaatcatccagagttgttcgaaaggagtgagggaagcacatatctc
tactttggtgagattcccatcgcccttttgcctgccccctttggggaattggaggatgta
cactactcaggaggtcgcaatcctataatattcaagattccaaaacttgtccacaaagaa
tttattcagaagtatgacacatctaactcagcacagtgcagtgtccgtagagaatttttg
gagaaatattttaatatatattccccagaaaatgtttatcaatcaattttcacaaatgag
aacagctcaaattcatctcttaagagcggaacctttggttttactcgcctgacggatctg
tgcccagctgaggttgggtttctgggaactagttcttttatggagcggctcttgttttct
cttacgagatgggaccgacaatttttggatgaaatgatagacttatttatggaaaccaac
catgatgattctgaagtcaattaccttgagagtggaaaagtgagagctgttacacgaatg
ttgctgacaccatcaaaatctgtaacaaatttccttcagaagaaatttgctactggtcct
ggtgatactccctttgaggctttagttgtttctcatgaagacaggcttttatcaaacatc
cggcttctccattcaacatacacagtcatccctaaaactagagctccacctgtcgacgct
cactgctctgatagaaattttgcttacaaaatgactgatgaacaacattccccatggatc
aagaggttgcttgttggctttgcacggacatctgagtttaacgggcccaggaagccaaat
gctcctcatcatttaatacaagaaattgattctgaattacctatttcacaacccgctctt
caattgacttacaatatttttgggtcttctcctcccatgcaaagctttgacccagcaaaa
ttactaacagattctggaaaacttcaaacactagatatattgttgaaacgcttgcgagca
aataatcaccgggttcttttatttgctcaaatgacaaagatgctgaatattcttgaggat
tacatgaactacagaaagtataaatatctcagacttgatggatcctccactataatggat
cgcagagacatggtcagggactttcagcatcggaatgatatttttgtgttcttgctaagt
acaagagctggtggacttggaattaatttgacagctgcagatactgtcatattttatgaa
agcgattggaatcccactttggatttacaggcaatggatagagctcacagattgggtcag
acgaaagatgtcactgtctaccgactaatttgtaaagaaacagttgaagagaagattctc
cagagagcgagtcaaaaaaatactgttcagcagcttgtcatgacgggtggtcatgttcag
ggtgatctcttggcacctgaggatgttgtttcattactcctggatgatgcccagttggag
caaaaattaaaagaaattccactgcagcaggcaaaggatagacaaaagaaaaaacaaacc
aagggtatacgggtagatgcagaaggtgatgcatctttggaagatttagcaaataatgta
cctgaggcagctggacatgaggattctccagatccggagaaaaccaaacccactaacaaa
aagagaaaacctgtgcaaacttcaaaatcgaggaatgcccaaatgacagatgaacttaac
acaatgtcaatggactttggtttggatgatgcccaacaaaatacagattcattagcaacg
aaatctaagagaccgaagaggccaaagaagagtgtaaatgacaaccttgagccagctttt
gtagtcacatccgcagttccagagcagagccaatatccatcttcattgcaaaccatcagt
tccagcagtgctgtaccacaaacaggcgaagatttctccacgcacgggaattcatttact
tga
DBGET
integrated database retrieval system
