Humulus lupulus (common hop): 133831644
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Entry
133831644 CDS
T11341
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133831644
Spliceosome [BR:
hlp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133831644
Other components
Complex C specific factors
133831644
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF8146
Motif
Other DBs
NCBI-GeneID:
133831644
NCBI-ProteinID:
XP_062118002
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Position
4:248739735..248744494
Genome browser
AA seq
866 aa
AA seq
DB search
MDEDQEMEKFGMDNDFEDAQWIGGEFYYRKRKEKPLQTKDDALYGVFADDDDDDDDDYPR
KQRRKDRNQPNLSKPVNFVSTGTVMPTQEIENHSKEAIDADNHDDSAPRPGLGLGFGSST
VTKASAEAVEGVDDEDDGESFLPTAFGKKIMEGAQRREKERQQQKRLKLLQQNDSQQSQS
GKRQSDAAGNVGVFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPKNMGMGY
NDYKEAEKVPTLQELTKPKPTAVPLAASTQPSKEKLWSKRALAKQKKNLDYMTAEELLAK
KQEQQGGGAEVVVQRVLDMRGPQVRVVTNLENLNAEERSKEEDIPMPEIQHNVRLIVDLT
ELDIQKIDRDLRMERDTAMALKDEKERLEVEAARQKKQLDSMEEIMGVLDRLGEENSMGI
LTLDSLAKCFSDLQRRYAEEYKLCNLSCIACSFALPLFIRVFQGWDPLRNPSHGLEMVSA
WKALLQGAESLDIWDSASPYSQLISEVVVPAVRISAVNTWQARHPEPMLGFIDSWEKLLP
SSVLETILDDVVMPKLRSAVDTWEPHRETVCIHVWVHPWLPLLGHKLEDVYQTIRSKLSN
VLGAWHPSDGSAFILLSPWKFVFDSISWEQLMRRFIVPKLSLILQEFQVNPANQKQLDQF
DWVIKWASVIPIHLMVDMLEKFFFPQWLQVLYHWLCSNPNFEEVTKWFLGWKELLPKELL
SNENIRSQLNCGLEMMNRAVEGMEVVQPGLKENLSYLRVLEQRQFEAQQKAAAQQAAASF
GGTSSMDGPELSMKEVVEAYAQQHGLLFKPKPGRMHNGHQIFGFGHVSIIVDSLNQRIYA
QTEEAWSLVSLERLLDLHNNSLLKRR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatcaagagatggagaagtttggaatggacaacgatttcgaagacgcgcaa
tggattgggggcgagttctactaccggaagcgcaaagaaaagcctctccagaccaaagac
gatgccctttatggtgtatttgctgatgatgatgacgacgacgacgatgattaccctaga
aagcagcgccgcaaggatcgtaatcagcctaacctttccaagcctgtcaatttcgtctcc
actggtactgtcatgcccacccaggagattgagaaccactctaaggaagctattgatgcc
gataatcatgacgatagtgctccacgcccgggtcttggtctgggttttggctcttctact
gtaacgaaggcttcggctgaggctgttgaaggagttgatgacgaggatgacggcgaaagc
ttcttgcccacggcttttgggaagaagataatggagggtgctcagaggagggaaaaagaa
agacaacaacagaagaggcttaagttgcttcagcagaatgattctcaacaatcccagagt
ggtaaacgccaatctgatgctgctgggaatgttggagtgtttgagaaacataccaaaggt
attgggatgaagctccttgagaaaatggggtataaaggaggaggtcttggcaagaacgag
caagggattgttgccccgattgaggccaagttgaggcctaagaatatgggaatgggatat
aatgattacaaggaggctgagaaagtgccaacactacaagaattgactaagcccaagcct
acggccgtgcctttggctgcctcaactcagccctccaaggaaaagctctggtcgaaacga
gcactagctaaacaaaagaagaatcttgattacatgacagctgaggaattgcttgctaaa
aagcaggagcagcaaggtggcggcgctgaggttgttgttcaaagggtgttggatatgcgt
ggtccccaggttcgtgttgtgaccaacttagagaatttgaatgctgaagagcgatccaag
gaagaagacattcccatgcccgagattcagcataatgtgaggttgatagtggatttaacc
gagctcgatattcagaagattgatagggatttgaggatggagagggacacagcaatggcg
ttgaaagacgagaaggaaagattagaagttgaggcggcaagacagaagaaacaactagat
agcatggaggagatcatgggtgtactggaccgattgggagaagagaattctatgggaatc
ttaactttggattcacttgcaaagtgctttagtgacttacaaagaagatatgctgaagag
tataagttgtgcaatttatcctgtattgcctgctcgtttgctttgcctttgtttattagg
gtgtttcaaggctgggaccctcttcgaaacccgtctcatggtttagagatggtatctgct
tggaaggctttgcttcaaggagcggaatccttggatatatgggactcagcttctccatat
tctcaactgatttctgaggttgtggtgcctgccgtgagaatctctgccgtcaatacttgg
caggctaggcacccggaacccatgcttggatttatagattcttgggagaagctgttgcct
tcatcagttcttgagaccatattggatgatgtagttatgccgaaattaaggagtgctgtg
gacacatgggagccgcaccgggagactgtttgtatccatgtctgggtgcacccatggctg
ccgctgttgggacacaagttggaggatgtttatcaaacaatacgctccaaattgagtaat
gttcttggtgcttggcatcctagtgatggttctgcttttattttactatcaccatggaag
tttgtttttgactcaatcagttgggaacaattaatgcgtagatttatagttcccaaatta
tcgcttatcctgcaagagttccaggtgaaccctgctaatcaaaagcagcttgatcagttt
gattgggtcataaagtgggcctctgttataccgattcatcttatggtagatatgctggag
aagtttttctttccccagtggctacaggttttgtaccattggttgtgttcaaacccaaat
tttgaagaggttacaaagtggtttttgggatggaaagaacttcttcctaaggagctttta
tcaaatgagaatatccggtctcagcttaactgtggtctggaaatgatgaatagggctgtt
gaaggtatggaagtagtccaaccaggtttgaaagaaaatcttagctatcttagagttctt
gagcaaagacagtttgaggctcagcaaaaagctgctgcacaacaagctgctgcaagcttt
ggtggcacaagtagtatggatggccctgagttgagcatgaaagaagttgtcgaggcctat
gcacaacaacatggcttgctttttaaaccaaaacctgggaggatgcacaatggtcaccaa
atatttggcttcggccatgtaagtatcatagtagactctctaaatcaaagaatatatgct
caaacagaggaagcttggtctttggtatctcttgaacgattgctggatctgcacaacaat
tctcttttaaaaagacgctga
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