Humulus lupulus (common hop): 133834311
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Entry
133834311 CDS
T11341
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133834311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hlp04040
]
133834311
Ion channels [BR:
hlp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133834311
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133834311
NCBI-ProteinID:
XP_062119869
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Position
5:6772943..6776843
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AA seq
666 aa
AA seq
DB search
MNNLEGKDLVALRNHYSKQYNNSNNSEDYHDHGRQEHSLNQILNPGVTDSRLWNKIFLAS
CVIGVCVDPLFLYIPIVNDDRKCLDRDHNMKIISLVLRSVTDFSYVLHLIFRLQWARTMS
KALGQSIFTKFPWSYLLIDLLAIIPTPQITGSRSLRARKFINLLLLLQYVPRILRVYLSA
KALGRVFDSLTQRVWVRGAFFFFLYIIFGHVFGAFWYFYSIFRETACWHLACMEHGPKEC
IPGPFYCLGPHPGMNVTKLNQFFPVDPPNADIFKFGIFSEAIESRIVSKTDFPEKFFRSF
WWGLRNLSSFGQNLDTTSNVQENMFAITISTLGLLLFLYLIGNLQTYMQLETTKSEEARR
KLSIKQPEIDSFLSNHDLPQYKKKAIKRYLTRTIREDKDFDVKHLFSLLGGHDHHHIETF
AAWVTKILDLKKNVNSTSEKKADLWLSKNDIPQDLKRIIKKYIQMRLQDGKDVDIDHILH
ILPLSQGMLIKKHMCFPMLKKVPLFQNTDEHVYETICKYLKPVTYSEKSYIIRKGEPLDM
ILFITQGVVWAFGNATTPISRLQKGDFYGNELIEWQLKSTSIDEFPISVANLKSHTNVEA
LALMANDLEHVVSNCWFKFSPTCSSMPESLKPFAVRFLQQLMLRQVRRRRKKVKESQSGE
VSVKML
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcttgaaggcaaggatttggtagcattgaggaatcattattcgaagcagtat
aataattccaacaactctgaagattatcatgatcatggaagacaagaacattcactaaac
cagatattgaatccaggggtaacagactctcgattatggaataagatattcttggcttca
tgtgtaatcggagtctgcgtcgatccattgttcctctacattccaattgtgaacgatgac
cgaaaatgtctcgacagagaccacaatatgaagatcatatctcttgttttacgatctgtt
accgatttctcttatgttttacacttgatttttcggcttcagtgggcacgaaccatgtcc
aaggcacttggtcaatccattttcacaaagtttccatggtcttatcttttaatagatctt
ttagccattattccaacccctcagattacaggatcaagatctttgagagcaagaaagttc
atcaacttactacttcttctccaatacgtgcctcgaattcttcgtgtgtacttatcagcc
aaagcgttaggaagagtttttgactcactgactcaacgtgtatgggtcagaggcgccttc
ttttttttcctctacattatttttggtcatgtgtttggagccttttggtacttctattca
atttttcgtgagacagcttgctggcaccttgcctgtatggaacatggaccaaaagaatgt
atacctggtcctttctactgtcttggacctcatcccggaatgaatgtgaccaaactgaac
caatttttccctgtcgatccaccaaatgcagatatcttcaaatttggaatattttctgaa
gctattgaatctcgtatagtcagcaaaactgattttcccgaaaaattctttcgcagtttt
tggtggggtttaagaaatttgagttcttttggtcaaaacctggacacaactagcaatgta
caagaaaacatgttcgccattaccatttctaccttgggtttacttttatttttatatctt
attggaaatctgcagacatacatgcagttggaaaccacaaaatcagaagaggcaagaaga
aagttaagtatcaagcaaccagaaatagattcttttctatcaaaccatgaccttccacag
tataaaaagaaagccatcaagagatacctaacccgaacaattagagaagacaaagatttt
gatgtcaaacatctcttttctctacttggagggcatgatcatcatcacattgagacattt
gcagcttgggtaaccaaaatattggacctgaaaaaaaatgtgaacagtacaagtgagaaa
aaggcagacttgtggctgtcaaaaaatgacattcctcaggatctaaagcgaattattaag
aaatacattcaaatgagattgcaagatggaaaagatgtggacatcgaccatattttgcat
attcttcctttgtcacagggaatgctaattaagaaacacatgtgtttccctatgttaaaa
aaagttccattatttcaaaacacggatgaacatgtttacgaaacaatatgcaaatatctg
aaaccagtcacatattcagagaaaagttatatcattcgaaaaggagaaccacttgatatg
attctcttcatcacacaaggtgttgtgtgggcatttggaaatgctactactcccataagt
cgacttcaaaaaggtgatttctatggaaatgaactcatagaatggcaattaaagtcaaca
tccattgatgagtttcctatttcggttgctaatcttaaatcccataccaatgttgaagct
cttgctcttatggccaatgacttggaacatgtagtctccaattgctggttcaagttctcc
cccacctgctcatctatgcctgagagcttgaagcctttcgcagttcgttttctacaacaa
ctaatgttgcgacaggttcgaaggagaaggaaaaaagttaaggaatctcagtcaggagag
gtatcagtgaagatgctttga
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