Humulus lupulus (common hop): 133834314
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Entry
133834314 CDS
T11341
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133834314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hlp04040
]
133834314
Ion channels [BR:
hlp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133834314
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Gene cluster
GFIT
Motif
Pfam:
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
133834314
NCBI-ProteinID:
XP_062119872
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Position
5:6386826..6391676
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AA seq
670 aa
AA seq
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MSNLDEDKGLVASRDNNAKQDNFKVTADGREVDKIYNPWATYSRLWNKIFLASCVVGVSI
DPLFLYIPIVNDDKKCLDRDYKMEIISLVLRSLTDFSYVLHIVFRLQSALNTSKELHQSI
FTKFPWYYLLIDVLAILPLPQVIVLVYFSKITGSRSLTARKFINLILLLQYVPRILRVYL
SAKELGKVFDSLTRRVWVRGAFFFFLYIIFGHVFGAFWYFYSIFRETACWHHTCLEHGPE
ECTPGPFDCLGPHPMVNVTKLKQFCPVDPPNANIFNFGIFSEAIESRIVNKTDFPQKFTR
SFWWGLKNLSSFGSNLETSSNVQENLFAILISILGLLLFLYLIGNLQTYMQFETIKSEEA
RRKINIIQPEVDSYLSNHDLPPQKKKLINRYLSRTIREGKDFDVKHLFSLLEEHADHGQH
KNEAFATWVTKLLDVKKHERSTMGQKVELWISKNEIPQDIKQKIMKYVQFRLQEGKDVDI
QHLLHTLPPTLGMSIKRHICFPLLKKVPLFQNINEYVYETICKYLKPVIYSEKSYIIRKG
EPIDMVLFITQGVVWTFGSSTIPMNRLQKSDYYGNELIEWQLNSTSYKDFPISTANVKSH
TKVEAFALMAIDLEHVLSSCWLKFFQCYSTNETMSSEGLKSFAATCVQRQFRRYMKNKKA
QENKLSICVN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcttgatgaagacaagggtttggtcgcatcacgggacaataatgcaaagcaa
gataatttcaaagtcactgcagatggaagagaagtagacaaaatatacaatccatgggca
acatactctcgcctatggaataagatattcttggcttcatgtgtagttggagtctcaatt
gatccattgttcctttacattccaattgtaaacgatgacaaaaagtgcctcgacagagac
tacaaaatggagattatatctcttgttttacgatctcttaccgatttctcttatgtttta
catattgtttttcggcttcaaagtgcactgaatacgtccaaggaacttcatcaatccatt
ttcacaaagtttccatggtattatcttctaatcgatgttttggccattcttcctcttcct
caggtgatagttttagtgtacttctccaagattacaggatcaagatctttgactgcaaga
aagttcatcaacttaatacttcttctccaatacgtgcctcggattcttcgtgtgtactta
tcagccaaagaactagggaaggtttttgactcactcactcgacgtgtatgggtcagaggt
gccttcttctttttcctctacattatttttggtcatgtgtttggagccttttggtacttc
tattcaatttttcgtgagacagcttgttggcaccatacctgtctagaacatggaccagaa
gaatgcacacctggtccttttgactgtcttggacctcatcccatggtgaatgtgacaaaa
ctaaagcagttttgccctgttgatccaccaaatgcaaatatcttcaattttggaatattt
tctgaagcaatcgagtctcgtatagtcaacaaaacagattttccccagaaattcactcgt
agtttttggtggggtttaaaaaatttgagttcttttggctcaaaccttgagacaagtagc
aacgtacaagaaaacttgtttgcaattctcatttctatcttgggtttacttctattttta
tatcttattggaaatttgcagacatatatgcagttcgaaactataaagtcagaagaggct
aggagaaagataaacatcatacaaccagaagtagattcttatctatcaaaccatgacctt
ccaccgcaaaaaaagaaactcatcaacagatacctaagtcgaacaattagagagggcaaa
gattttgatgtcaaacatctattttctctacttgaagagcatgctgatcatggccaacac
aagaatgaggcatttgcaacttgggtgaccaaattattggatgtgaaaaagcatgagagg
agtacaatggggcaaaaggtagaattatggatatcaaaaaatgaaattcctcaggatata
aagcaaaagattatgaaatacgtacagtttagattgcaagaaggaaaagatgtagacatc
caacatcttctgcatactcttcctccgacactaggaatgtctataaagagacacatatgt
ttccctctcttgaaaaaagttccattgtttcaaaacataaacgaatatgtttatgaaaca
atatgcaaatatctaaagccagtcatatactcagagaaaagctatatcattcgaaaggga
gagcctattgatatggtactcttcatcacacaaggtgtggtatggacctttggaagtagt
accattcctatgaatcgtctacaaaaaagtgattactatggaaatgaactcatagaatgg
cagttaaactcaacatcctataaagactttcctatctctactgccaatgtcaaatcacat
accaaagttgaagcctttgctctaatggcaattgacttagagcatgtgctctccagttgc
tggctcaagttctttcaatgctactcaacaaatgaaaccatgtcatccgagggcttgaaa
tctttcgcagctacttgtgttcagcgacaatttcgacgttacatgaagaacaaaaaggcg
caagaaaataagctcagtatatgtgtcaactga
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