Humulus lupulus (common hop): 133834339
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Entry
133834339 CDS
T11341
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133834339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hlp04131
]
133834339
03029 Mitochondrial biogenesis [BR:
hlp03029
]
133834339
Membrane trafficking [BR:
hlp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133834339
Atg1 complex
133834339
Mitochondrial biogenesis [BR:
hlp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133834339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
133834339
NCBI-ProteinID:
XP_062119908
LinkDB
All DBs
Position
5:complement(8432880..8436302)
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AA seq
669 aa
AA seq
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MIRRRRRTTTTLTTVTLFLTLLSIALKLVWFAWLDHKASVWIKGMDLHSNPPSELGKLEH
IVSQFLLKSLHIILDSRIPSLRPHDRSGDLSSVSRVKKSDKWFNLIRGDRPAALENLNFW
HRNVVDPMIIDIILVHEGLNSSSVDNLYTASTVGTPAETVIERWVVQYESPRVVAPQTGE
MSVSYKKTYQKSIVLLRALYSLMRLLPAHKIFKQLTSSSHTYNFDIIYKVSSFGDPFTRP
EEKLMEEYSFTPVEAFPGRLCMSVTYHSSLSNFNLEPSTAMPPKIITDYVGSPATDPLRS
FPASDKGVRATSFPLRGVQSPSSAQSERPHSWTSGFHRPGPFIQNQTLFGSPPAYRPSPT
SSDFPSSPNDMYPIRVQNRLLSYQKTIGFDEYQLSPPFSSSPSPSPSPSPPTYFYNGNPN
SMQARRHSETAPVSIPSTMTARGSRYISSNFSDPNRNSLPPLSPRSTRNDTSSQESPSGI
RSLRRLDPSRAGETPTGNSNHFTGPKALKDSKDDSGRFSGPLSSSDSPRVGFSPGSGRLS
FQDDSDDLGFSCPFDVDDLPDFHPSQNLSGKRSSDSSSLSQTMVRKSQSHDAAVGVLVHM
LRNAPPLRQDSSCYSTNSFKAEPDGGITTASGFFMPRKAADALEELRSYREMKDLLLSKS
GTRVVSKEA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcagaagacgacgaacaacaacaactttaaccaccgttactctctttcttacc
cttttgtcaattgccttaaagcttgtgtggttcgcatggttagatcataaagcttcagtt
tggattaagggtatggatttgcatagtaaccctccatccgaactggggaaattggaacat
atcgtttctcaatttcttttgaagagcttgcatattattttggactctaggattccttct
ttgcgccctcatgatcgtagtggcgacctttcgtcggtatctcgagtgaaaaagagtgac
aaatggttcaacttaatacgaggagatcgccctgcagcattagaaaatttgaatttttgg
catagaaatgtggtggatccgatgataatcgacataatacttgttcatgaagggctcaac
tcttcatccgtggacaatctatacactgcatcaacagtcgggacgcctgctgagacggtt
atagagaggtgggttgttcagtatgaatcccctagggtggtagctcctcaaactggtgaa
atgtctgtctcttacaaaaagacatatcagaagtcgatagtacttctacgtgctctgtat
tcgctgatgagacttctgccagctcacaagatctttaaacagctaactagctctagtcat
acttataattttgatattatttacaaggtttcttcttttggggatccattcactaggcca
gaggagaaattgatggaagaatatagtttcacgcccgtggaggcttttcctggccgtctt
tgtatgtctgtaacttaccattccagcctatccaattttaatcttgagccttcaacagca
atgccgcctaagataattacagattatgttggtagccctgctactgaccctctgagatct
ttccctgcttcagacaagggcgtccgtgcaacttcctttccattgagaggggttcaatct
ccatcttctgcacagtctgaacgcccacacagctggacaagtggttttcacaggcctgga
ccctttattcagaaccaaacactttttggatctccacctgcatatcgtccatctcctacg
tcatctgattttccgtcatcacctaatgatatgtatcctatcagagtccaaaaccgattg
ctaagctatcaaaagacaatcggtttcgatgagtatcagctttcacctccattttcatcg
tctccatctccatctccatctccatctccccctacatacttctacaatggtaaccctaat
tcaatgcaagcccgtagacattcagaaactgcccctgtatctattccatcaacaatgaca
gcaagagggtctagatacatttcttccaatttttccgatccaaatagaaattctcttcct
ccgttatcccccagaagcacaagaaatgatacttcatcacaggagtctccatctgggatc
aggtcattacgaagattagatccttcgagggctggagaaaccccaactggaaattcaaat
catttcactggtccgaaggccttaaaagatagtaaagatgattcagggcggttttcagga
ccattgtcttccagcgactcaccacgagttgggttctctccaggctccggcagattgtct
tttcaggatgactcagatgatcttggcttctcatgtccttttgatgttgatgatttacca
gattttcatcccagtcaaaatctttctggcaaaagatcttccgactcttcttcactgtcg
cagaccatggttcgaaaatcacagtcacatgatgcagctgttggtgttcttgttcacatg
ctgaggaatgcacctcctctgcgtcaagattcgagctgttactcaaccaactccttcaag
gctgaacctgatggtggaatcactactgcttcaggcttctttatgccccgaaaggcagct
gatgcactcgaagagcttcgaagttacagagaaatgaaagacctcctcctctctaaaagt
ggaactagggtggtttccaaagaagcatag
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