Humulus lupulus (common hop): 133834396
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Entry
133834396 CDS
T11341
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133834396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133834396
Spliceosome [BR:
hlp03041
]
Common components
Common spliceosomal components
SR proteins
133834396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
133834396
NCBI-ProteinID:
XP_062119980
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All DBs
Position
5:10430446..10434380
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AA seq
278 aa
AA seq
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MSGRFSRTIYVGNLPSDIREGEIEDLFYKYGRIVDVELKIPPRPPCYCFVEFENSRDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSERRGGYGGGGGGGGGGGGGGGSGGGTGRFGA
SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDGDGTFGLVDYTNYDDMKYAI
RKLDDTEFRNPWARGYIRVRKFEASPSRSASRSRSRSRSPKRNHSKSLDRSSVSRSRSRS
PSPVKSSRPRSRTKSRSRSMSKSRSRSGSPRPVRSGSG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgcttttctcgcactatttatgttggcaacctgccttcagatataagagag
ggggaaattgaagatctgttctataagtatggccgtatagtggatgttgaactgaagata
ccacctcgtcctccatgctattgctttgttgagtttgagaattctcgagatgcagaagat
gcaatcaggggccgagatgggtataactttgatggttgccgtttgagggttgagcttgcc
catggtggtagaggaccatcttctagtgagcgtcgaggtggctatggtggtggtggtggt
ggtggtggtggtggtggtggtggcggtggcagtggtggtgggacagggcggtttggtgcc
tctcggcattctgagtttcgagttattgtgcggggacttccttcttctgcttcatggcaa
gatttgaaggatcatatgcgcaaagctggtgatgtatgttttgccgaggtttctcgtgat
ggtgatgggactttcggtcttgttgattatactaattatgatgacatgaaatatgctatt
cggaaacttgatgatactgaatttagaaatccatgggcaagaggttatatcagggtcagg
aagtttgaagccagcccttccaggagcgcaagtagaagccgcagcaggagtagaagtcca
aaaaggaaccacagtaaatctttggacaggtcatcagtatcaagatctaggtctaggtct
ccttcccctgtcaaatcttccaggccaagatcaagaacaaaatcaagatcaagatcaatg
tcaaagtcgaggtcaaggtcaggatccccccgtccggtgcggtctggcagtggttga
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