Humulus lupulus (common hop): 133834470
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Entry
133834470 CDS
T11341
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133834470
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133834470
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Paralog
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
133834470
NCBI-ProteinID:
XP_062120073
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All DBs
Position
5:12347411..12351415
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AA seq
668 aa
AA seq
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MERSRSKRYYYNDQDYDSETVGRTRPRYNNHYGNNNNHRHRGNAGGGGGGGGGRTSKPPQ
PDQSLSVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD
TRRRDPEGRMPTFSPAQEALFLIHERILETDVPGFGGGEEEDYGGVRGGGGGGNRVTTRL
VVSRMHVGCLLGKAGKIIEQMRMETKTQIRILPRDSNLPRCVSMSEEIVQVLGDVNAVKN
AVAIISSRLRESQHRDRSHFHGRLHSPERFFSPDDDFVPHMNNAGRRSTMEGPGFGSRLP
ASNNRGSNYGSRSSGLTNEPGSGPMADNMQQPFYGEDLVFRILCPIDKVDSVVGESDGII
DLLQNEIGVDVKVTDPVAGSDEQIIIISSEEGPDDELFPAQEALLHIQTRILDLIPEKDN
IVTTRLLVPSGDIGCLEGRDGSLSEIRRLTGANIQILPRDELPTCISGSDELIQIVGEIK
AARNALVEMTSRLRSYLYREFFQKDSTPPFVSVSGAFGGAVGQGSSSPGRTPVRDNHTLS
DPSTATYQNAQTVITAPSVKETGIETTKQNENDRREDPPSGLNRISVPLVTRSTIEVVIP
EPAVPKLITKSKNKLAMISELSGANVTLLEDRPELTQKIIQISGAPEQVERAQSLIQGFI
LSTQEDGP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtctagatctaagaggtactactataatgaccaagactatgactctgagact
gttggtagaaccagacccaggtacaacaaccattacgggaacaataataatcatcgccac
cgtggtaacgccggaggtggaggcggaggaggtggtggaaggacttctaagccgcctcag
ccagaccaatctctttcggtgaccacaagttaccgaatcctttgtcacgatatgaaggcc
ggcggtgtaattggcaagtccggtagtatcataaagtcgattcgacaacacaccggagcg
tggatcaacgtgcacgagctgattcccggtgatgaggagcgaatcatcgagatttccgat
actcggcggcgagacccggaaggccgaatgccgaccttttcgcctgcccaggaggctttg
tttttgatccacgagaggattctcgagactgatgttcctgggtttggtggtggagaggag
gaggattatggtggagttagaggtggtggcggtggtgggaaccgggtgacgactaggctg
gtcgtgtcgagaatgcatgtggggtgtttgcttggcaaggcagggaagattattgagcaa
atgaggatggagactaagacccagattaggattttgcctagagacagtaatctgcctcgc
tgcgtttcaatgtcggaggagattgttcaggttttaggcgatgtaaatgctgtaaagaat
gcagtagcaataatttcatcacggttgagggagagtcagcatcgtgaccgtagtcatttc
catgggcggttgcattcccccgaacgtttcttttctcctgatgatgattttgttcctcac
atgaacaatgcaggtcgccggtcaactatggagggacctggttttggatctcgcttacct
gcctccaataacagaggaagcaattatggctcccgttcatctggtttaacaaatgaacct
ggttctggccccatggctgacaatatgcagcagcccttctatggtgaggatcttgtgttt
cgaatactgtgtccaattgacaaggttgacagtgttgttggtgagtctgatgggattata
gatctgcttcaaaatgaaatcggtgtggatgttaaagttactgaccctgtggctggatca
gatgaacagattattatcatttcatctgaggagggccctgatgatgagctctttccagct
caggaagctctgttgcatattcaaactcgcattcttgatcttattcctgagaaggacaac
attgtaactactagattgcttgttcccagtggtgatattggatgtttagagggaagagat
ggatccttgtcagaaataagaaggttaactggtgccaatattcaaattttacctagagat
gaacttcctacatgtatatcaggaagtgatgaactcatacagatagtaggggagataaaa
gcagcccgaaatgcccttgttgagatgacatcaagacttcgaagttacttatatagggag
ttctttcaaaaggattctacaccaccttttgtctctgtatctggcgcttttggtggtgct
gtgggacaggggagctcctctcctggcagaactccagttcgcgataaccataccttaagt
gatccttctactgctacctatcaaaatgctcaaactgtgataacagcaccgtcagtgaag
gagactggaattgaaacaacaaagcagaatgagaatgatcggcgtgaagaccctcctagt
ggtttgaatagaatctccgtaccacttgtcacgaggagtacaattgaagttgtcatacca
gaacctgcagttccaaagctcataacaaaatcgaaaaacaagcttgccatgattagtgag
ttatcaggagccaatgtaaccctgttagaagatagaccagagttgacccaaaagatcatt
caaatatcaggcgctcccgaacaagttgagagagcacagagcttgatccaaggctttatt
ttaagcacacaagaagacggcccataa
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