Humulus lupulus (common hop): 133834493
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Entry
133834493 CDS
T11341
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133834493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133834493
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133834493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_22
TIP49
RNA_helicase
Rad17
AAA_28
NPHP3_N
AAA_33
AAA_17
AAA_18
AAA_2
IstB_IS21
nSTAND3
Mg_chelatase
ATPase_2
NACHT
Bac_DnaA
Parvo_NS1
TsaE
Viral_helicase1
NB-ARC
AAA_3
ABC_tran
AAA_25
Cytidylate_kin2
AAA_11
CPT
AAA_7
Sigma54_activat
Vps4_C
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
133834493
NCBI-ProteinID:
XP_062120108
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All DBs
Position
5:14145881..14152108
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AA seq
623 aa
AA seq
DB search
MSTSTSMLEDSERVEPQFDLMKSMLRVSYAGSANSKKKKNENLELELDLPVPVSEVKVKS
GFGDMGGMKGILKQLEKKVLVPLYQHQLLEWLGVRPISGLLLHGPPGCGKTKLAHAIASQ
TGYPFYNISATEFVSGVSGESEENIRDLFQKAYKTAPSIIFIDEIDVVASKRENLQREME
RRIVTQLMTCMDAYSESKSSDDRQGYVLVIGATNRPNAIDPALRRPGRFECEIELGVPDE
NARAEILSVLTRTMRLEGSFDLLKIARSTPGFVAADLKALASEAGHLVAEKILNKRKSNL
CEKSIDEEQSMDWLKEPVMPEEMEGISITMADFEEAIKTVQPSTRREGFSAIPNVKWEDV
GGLDLIRKELDRYIVRRIKYHEKYKRFGVNLDTGILLYGPPGCGKTLIAQAVAKEAGASF
IHIKGPELLNKYVGESESAVRTLFGRARTCSPCILFFDEVDALTKERGKEGSWVTERLLN
QLLIELDGVDKRQGVFVIGATNRPDVMDKASLRPGRFGKHLYVPLPTPDERGLILKALIR
DKPIDESVDLNAIGRMKGCDNFSGADLHALANEAALAALEDEDEDTIKTTHFEQALAKIS
SSVPPEQRQYYQVLSKRFTATVD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcgacatcaatgttggaggacagtgagagagtggagccacagttcgacttg
atgaagtcgatgcttcgagtttcatatgctggatctgccaactcgaagaagaagaagaat
gagaatttagaattggaattggaccttcctgttcctgtgagcgaggtaaaagtgaaatca
gggtttggggatatgggtgggatgaagggaattttgaagcagcttgagaagaaggtgctc
gtgcctctctatcagcatcagctattggagtggcttggagttcgaccaatttctggcctt
ttgttgcatggaccaccgggctgtggtaaaaccaaattggctcatgccattgccagtcag
actggatatcccttttacaatatttctgccactgagtttgtctctggagtttcaggtgaa
tctgaagaaaatataagagatctttttcagaaagcatacaagactgccccttcaattata
tttattgatgagattgatgttgttgcgtcaaaaagagaaaatttacagagagagatggaa
cgacgaattgtgacacaattgatgacttgtatggatgcatattcagaatccaaatcttct
gacgatagacagggttatgttcttgtaattggagccactaatagacctaatgctattgat
cctgcactaaggaggcccggtcgatttgaatgtgagattgagttaggtgtgccagatgaa
aatgcgagggccgagattctttctgtactcacaagaaccatgagacttgaaggctctttt
gatcttcttaaaatagccaggtctaccccaggatttgttgcagcagatttgaaggccctt
gcttctgaagcaggtcaccttgtagcggagaagattttaaataaaagaaagtccaattta
tgtgagaagtctatagatgaggaacaaagtatggactggttgaaagaaccagtgatgcct
gaagaaatggaagggataagcatcaccatggctgattttgaggaagcaattaaaaccgtc
caaccctctactagaagagaaggtttttctgccattcctaatgtaaaatgggaagatgta
ggtgggctagatcttataaggaaggaacttgatcgatacatagttcggcgtatcaaatat
catgagaaatataagaggtttggagtgaatttagatacaggaattttgctttacggacct
ccaggatgtggcaagaccttgatagcacaagctgttgctaaggaagcaggagctagtttt
attcacatcaagggtcctgaacttctgaataaatatgttggagaaagtgagtcggcagta
cggacgttatttggccgtgcaaggacgtgttcgccatgcatacttttctttgatgaggtg
gatgccttgacaaaagagcgtggaaaggaagggtcatgggtgactgagcggctactgaac
cagttgctcatcgagttagacggtgttgataagcgtcagggtgtctttgtcattggtgcc
acaaatagaccagacgtgatggacaaagcttctttgcgaccgggtaggtttgggaagcat
ctatacgtgccattgccaactcccgacgaacgtggtttgatcttgaaagctctgataagg
gataagccgatcgatgaaagcgttgatttgaatgctattggtcggatgaagggctgtgat
aattttagcggggctgaccttcatgcattggctaatgaagctgctttggctgcccttgaa
gatgaagatgaagatactattaaaacaacacattttgagcaagcacttgctaaaatctct
tcatctgtgccacctgagcaaagacaatactaccaggtattatcaaagcgcttcacggca
acagtggactaa
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