Humulus lupulus (common hop): 133834571
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Entry
133834571 CDS
T11341
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133834571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hlp04040
]
133834571
Ion channels [BR:
hlp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133834571
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133834571
NCBI-ProteinID:
XP_062120215
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Position
5:complement(18959527..18965072)
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AA seq
713 aa
AA seq
DB search
MNFQQEKVVRFQDWNAEKNKEVLYTPNDEMNPGKLKLTLNSVSHTFQRSFESGSERLKRI
KRSFKSCSFDSAMAKSFGSEKKILDPQGPFLQRWNKIFVLSCVIAISLDPLFFYIPVVDD
ARKCLDLDRKLEITASVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDACAIAK
RYLMSYFLIDILAVLPLPQVVILIVIPRLKGSSSLNTKNLLKFIVLFQYFPRIIRVYPLY
TEVTRTSGILTETAWAGAAFNLLLYMLASHVLGAFWYLVSIERETTCWQEACGKNLTCSL
DSLYCDSFKRNNTFLNASCPIKEDENDFFNFGIFLDALQSGVVETSTDFTQKFFYCFWWG
LRNLSSLGQNLETSTYVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRR
DAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEENLICNLPKDLRRDIKRHLCLALLM
RVPMFEKMDEQLLDAMCDRLKPVLYTEDSYIVREGDPVDEMLFIMRGRLLTVTTNGGRTG
FFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQALTEVEAFALKADDLKFVASQF
RRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKAGAS
SPSLGATIYASRFAANALRAIRRNNTRKTRMPERMPPMLLQKPAEPDFTAEEQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccagcaggagaaagtagtgaggttccaggactggaatgcagagaaaaataaa
gaggtgctgtacactccaaatgatgaaatgaatccaggaaaacttaaactgacattaaac
tcggtttcacacacatttcaaagaagctttgaatctggttctgagaggcttaaaaggatt
aaacgatcatttaagtcctgttcatttgatagtgccatggctaaaagctttggttccgag
aagaagattcttgatccacaagggccattcctccagagatggaataagatatttgtgctg
tcatgtgtcattgccatttctctggatcctttgtttttctatatcccagtggttgatgat
gcgaggaagtgtttagacttggacaggaagctggagatcactgctagtgtgttgcgttct
ttcacagacatattttatataattcatattatctttcaattccgtactggatttattgct
ccgtcttctcgagtttttggaaggggtgttttagttgaagatgcttgcgctattgctaag
agatatctaatgtcatacttcttaatcgatatccttgctgtccttcctctcccacaggtg
gtgattttgattgtcattccaagattgaagggctcatcatcattgaatacgaagaacttg
ttgaaatttattgtcttgtttcaatattttccaaggattattcgagtgtatccattgtat
acagaagttacgagaacttctggcatactcactgaaactgcatgggcaggagctgcgttt
aatcttttactttacatgcttgccagtcatgtacttggagccttctggtacttggtttcc
atagaacgggaaactacatgctggcaagaggcctgtgggaaaaatttgacatgcagcctg
gactctttatattgtgatagcttcaaaaggaataacacattcttgaatgcttcctgtcca
ataaaagaagatgaaaatgatttctttaattttggaatattccttgatgcccttcaatct
ggtgttgttgagacatctactgattttacacaaaagtttttttactgcttttggtggggt
cttcgaaatttgagttcacttggccaaaatcttgagactagtacctatgtctgggaaatt
tgctttgcagtcttcatttcaattgctggattagtactattttcatttcttattggaaat
atgcagacatatttgcagtccaccactacaagattggaggagatgagagtgaaaaggaga
gatgcagaacagtggatgtcccatcgcttgctccctgacagtctgagagagcggatcagg
cgttatgagcaatacaaatggcaagaaaccagaggtgttgatgaagagaatctaatttgt
aatcttcctaaggatctcagaagggatataaagcgtcatctctgcctggctttgctaatg
agagtgccgatgtttgagaaaatggatgaacaattattggatgcgatgtgtgatcgactc
aagccagtactatacacagaggatagctacattgttcgagagggagacccggttgatgag
atgctcttcataatgcgaggcaggctgctgactgtgaccacaaatggtggaagaactggt
tttttcaattctgaatatcttaaggctggtgacttttgtggagaagaactccttacatgg
gctttggatccccattcttcatcgaatctccctatctcgactagaactgtgcaagcactg
acagaagttgaagcctttgcattaaaggctgatgatttgaaatttgtagcgtctcagttc
cggaggcttcacagtaagcagctgcgccacactttcagattttactctcagcagtggagg
acttgggcagcttgttttattcaagcagcatggcgccgctatagcaagaaaaagctcgaa
gagtctcttagggaagaagagaacaggttgcaggatgcactggccaaggccggggcgagc
tcacccagtttaggtgctaccatctacgcttcccgatttgctgctaatgcgctgcgtgcc
ataaggcgtaataatactcgaaaaacaaggatgccggaaagaatgccaccgatgctgctt
cagaagccagctgagccagattttactgctgaagaacagtag
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