Humulus lupulus (common hop): 133834583
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Entry
133834583 CDS
T11341
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133834583
Spliceosome [BR:
hlp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133834583
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
133834583
NCBI-ProteinID:
XP_062120232
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All DBs
Position
5:complement(19562515..19567373)
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AA seq
451 aa
AA seq
DB search
MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVAGNVLLVTIEGA
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKNALDGRSIPSYL
LPENVGPCTLRITYSGHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPEIQTAVVAK
EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTLSNVSPVTMVNSQPSILGQQP
SNAPLMTSNPPQYSGAQYAPTEQVGMPQPSAGWGAAAPPPAPQSMSMPMPMSNHPYMPPR
HGTMPSHPGTMHMPNQGGLSQTTVYRPDHIQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtatctagccagccccagtttcggtacacccagccaccatctaaggtcctc
catttaagaaacttgccatgggagtgcacagaagaggaattgattgaactggggaagccc
tttggtaaagtggtgaacaccaagtgcaatgttggtgcaaatagaaaccaggcttttatt
gaattcgcagatttaaatcaagcaattgcaatgatatcatattatgcctcatcttcggag
ccagctcaagtccgggggaaaactgtctacttacagtattccaataggcaggaaatagta
aacaacaaaactgctgcagatgtagctgggaatgtacttttggtaacaatagaaggtgct
gatgcacgccttgtcagcattgatgttttgcatttggtgttttcagcttttggatttgtg
cataagattactacttttgagaagactgctggatttcaggcactagtacaattctcagat
gcagaaactgctacttcagcaaaaaatgctcttgatggaagaagcattcctagttacctg
ctgccagagaatgtgggaccatgtaccctgaggatcacatattctggacacacagatctg
agtgtgaaatttcagtcccacagaagcagggactacactaatccttatcttccagttgct
ccctcagctatagatggaagtggtcagttcactgtgggtttggatggaaagaaacttgaa
cctgaaagtaatgtgctgcttgcttccattgaaaacatgcagtatgctgtcaccttggat
gtgttacacatggttttttcttcttttgggcccgttcaaaagattgctatgtttgataag
aatgggggagttcaggctttgattcagtatcctgaaattcagactgcagtagttgccaag
gaagccttggaaggacattgcatttacgatggagggttttgcaaactccatttatcgtat
tcaaggcatactgatctcagtataaaggtcaataatgatcgcagcagagattatacactc
tcaaatgtttctcctgttaccatggtgaattcccagccatcgattttaggccaacagcca
tctaatgctccattgatgacttccaatcctccccagtattctggggctcaatatgctcca
actgagcaggttgggatgccacagccttcggctggatggggtgctgctgctcctccacct
gcgcctcagtccatgtctatgcctatgcctatgtctaatcatccctacatgccgcctaga
cacgggaccatgccttctcacccaggaacgatgcacatgccaaaccagggtggcctttcg
cagacaacagtataccgccctgatcatattcaatag
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