Humulus lupulus (common hop): 133834735
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Entry
133834735 CDS
T11341
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 isoform X1
KO
K28108
shortage in chiasmata 1
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hlp03036
]
133834735
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
133834735
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GFIT
Other DBs
NCBI-GeneID:
133834735
NCBI-ProteinID:
XP_062120426
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Position
5:34278848..34285197
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AA seq
1367 aa
AA seq
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MRARFSDVDYFATTPFQLNETLTFLQLPVAQVSLSPPVTSTFSDLLFLRSYSTSKVSLRI
ENLPIETALSQFFSNVIPQKIVTCAEDFEDDVPSSSHTSSSSRSHETHLSENIRVLNEQK
EVESHRASRSKVVEMEVLNKSNAVTVDVKVPRRYEVIQFETPELDEFVETSSFFENKGIH
ILSEVPEIEESLDMLKPGPATHYPNEVHKSVLSVEDITIEYPIGQKANSPEDFQDQIQFN
KGNFPILEVDEIILEHIAGFSVKEKFLSFIENAELQHLQTDDLEFNNKELWGSKDYDVSG
FISDHSLSPHSCGYELGSRDNFPEIDLISLVEISQIRMSSRIQRTSESECFLSDKPFVYQ
EFQILDKDSSQIFEDLLNRQTMYETETSDWMFNEDMNFKNFNKLIVSHELTLVDDTFKSL
PVPVLSDHGKLRSIYTIIEGKLAQLKPQPLSALDGIYLDWHILEEVSYDRNTSINYEKDL
HDMGSCNIDFDWDSFGDRNAVYDFIFSDDGVYAFNKEENGDSKELLSNVSIPVGIEPRHF
LGSEFPQPKNEECLARKNDERASFIFKSMSHSNDLDFFRKTQKASTGTNSEPTVKTFNKN
ATSPKVALGNSVADVSQGGESITLLDRDEDVNNQKKLFLNPSIQEKCNVRSEEPADNVET
CSMPLHPSMSFPEESKHRSPQESMSSLPKTVILVNTQNLDKEMIVSRRSTYQKILAIEKQ
GAQVVERDSDLPVDVVINSAICLVWYDCRNIGKKTTAVDEASSSLPLCIENIATNVLTLL
SFTFSGCILVFEGEHSFLSTVMESSDGLYAAAASLGIDVQLFCSYSSELTDEIIMSCIGY
ATGGVYPRMTESETLAESFLTKFPSVNPLTAHAILSSGGMLIEFLEWSNECRIRALQKFN
VPDESINLLGALLKYGEREDSRSIMTDYSSSVSSGMDSERFNLNVASKRKRWSYDDSLEN
IDIQTDDLLHDDTVKHFSKGTLNTSTGTKPYESFMSKDHDTFHEFKNPIPYESNLFHQEH
GFDEAMMMNHFVVPEPYDFQKSKEPQRFKETKKPALSSKDRLSGQLQGTDVDLLKSFDLH
DISSSDILFEDQKGEVIDLTGSPAPGMEFSSVDNPISFFIPEMEKYGMIKSKTARRLSFD
KNHQPKFPTSTEICSGSNIRNSVKDQKKSLHVGASNSSDIDLENNATSLDKRNKLLEDCF
KHRSAEKSQGLQFQGRNSSLHGDTPLSHALHLASPQQKSPWTMEFLNKIKEKSRIRHQSL
PCDTAAPCFGCSGDVSKVTKRRSPSILEFFKYQGGNNMRKIPEQKKHKRSTQLSSSKDEK
TSASTLPTWTPLDKRARQTLSFANEGKGQTKLVWSDGIHNPSKKFFH
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctcgtttctccgacgttgattacttcgccaccactccgttccaactcaacgaa
accctaaccttcctccaactcccagttgctcaagtctctctctctcctcccgtcacctcc
accttctccgacctgctcttcctccgatcatattccacctccaaagtctcccttcgaatc
gaaaatttaccaatcgaaactgctctttcccagttcttttccaatgttattcctcagaaa
atcgtcacctgcgccgaagattttgaggatgacgttccgtcctcgagtcatacaagttcc
agttccagaagccacgagactcatttatcggagaatattcgggttcttaacgagcaaaag
gaagtggagagtcacagagcttctcgatccaaagttgttgaaatggaagttcttaataag
agtaatgcagttactgttgatgttaaagttccacgacgatatgaagtaattcaatttgaa
acaccagagcttgatgaattcgtggaaacatcttcattctttgaaaacaaggggatccac
attctttctgaggttccagagattgaagaaagtttggatatgctcaagccagggcctgca
actcattatcctaatgaagttcacaagtcagttctgtctgttgaagatattaccattgag
tatcccatcgggcaaaaggctaattcccccgaagattttcaggaccagattcaatttaat
aaaggaaatttcccaattttagaagtggatgaaataattctggagcatattgcaggcttt
tctgttaaggaaaagtttctttccttcattgaaaatgctgaactacaacatttacaaaca
gatgacctggagttcaacaacaaagagctttggggttctaaagattatgatgtatcaggg
tttatttcagaccatagtctatcacctcactcttgtggatatgagctgggatcccgggac
aatttcccagaaatagacttgataagtctggtagaaatttcacagattaggatgagctct
agaattcaaaggacatcagaaagtgaatgttttctgtcagataaaccatttgtttatcag
gagtttcaaatccttgacaaggattcgtctcaaatttttgaagacctcttgaacagacaa
acaatgtatgaaacagaaacttctgactggatgtttaatgaagacatgaacttcaagaat
ttcaacaaattgattgttagtcatgagctaacacttgtagatgacacattcaaatcattg
cccgtacctgttctttctgatcatggaaaactgaggtcaatctacacaattattgaagga
aaacttgctcaactaaaaccacagcccttatctgcactagatggaatatacttggactgg
catattcttgaggaagttagctatgaccgtaacactagtataaactacgagaaagattta
catgatatgggttcatgcaacattgattttgattgggattcttttggtgatagaaatgcg
gtatatgatttcatcttctctgatgatggtgtatatgcatttaataaggaggaaaatgga
gattcaaaggagcttctttctaatgtatctatccctgttggaattgaaccaagacatttt
ttaggtagtgagttcccacaaccgaagaatgaagaatgcttggccagaaagaatgatgag
agggcttcattcatattcaagtctatgtcacattctaatgatcttgattttttcagaaaa
actcagaaagcctccactggaacaaacagtgaaccaacagttaagacattcaataaaaat
gccacatctcccaaagttgcactgggtaactcagtagcagatgtatctcagggaggggaa
tcaatcacccttttagatagggatgaggatgttaacaatcagaagaagctctttctcaat
ccatctattcaggaaaagtgtaatgtcagatctgaagagcctgcagataatgtagaaact
tgcagtatgcctttacacccttctatgtcatttccagaagagtctaagcacaggagccct
caagaaagcatgtcatctcttcccaaaacagtgatacttgttaacacacaaaatcttgat
aaggaaatgatagtatccagaagaagtacctatcaaaaaattcttgcaatagagaaacaa
ggtgcacaagttgtcgaacgtgattcagatttacctgtagatgttgtgataaattctgca
atttgtttagtttggtatgattgcagaaatattggaaagaaaacaactgcagtggatgaa
gcttcttcaagcttacccttgtgcattgagaacattgcaacaaatgttttgactttgctg
agtttcactttcagtggctgcattctggtctttgagggagaacacagtttcctttctact
gtaatggaatcctctgatggactttatgctgcagcagcgagccttggaattgatgtgcag
ctcttttgttcctattcatctgagttgactgatgaaattataatgagctgcattggatat
gccactggaggtgtatatccaagaatgactgaatcagaaactcttgcagagtcatttctt
acaaagtttccttcagtcaatcctttgacagctcatgcaattttatcttcgggaggcatg
cttattgagttcctggaatggtcaaatgaatgcaggattcgcgcgctccagaaatttaat
gttcctgatgaaagtatcaatttgttaggtgctttattgaaatatggtgagcgggaggat
tcgagatcaataatgacagactattcttcttcagtctcttctggtatggactctgaaagg
ttcaatctaaatgttgcttctaaaagaaaaagatggagctacgatgatagccttgaaaac
attgatatacaaacggatgatttattgcacgatgatacagtaaagcacttttctaaaggt
acccttaatacttctacaggaacaaaaccttatgagtcattcatgtcaaaagatcatgac
acatttcatgagttcaaaaacccgataccatatgagagcaatctgttccatcaagaacat
ggattcgatgaagctatgatgatgaatcattttgttgttccagagccatatgattttcaa
aagtctaaagaacctcaaaggtttaaggaaactaaaaagcctgctttatcttccaaagat
aggttgtcaggtcaactacagggaacagacgtggatttgttgaaaagctttgatctgcat
gatatcagcagttctgatattctttttgaggaccaaaaaggtgaagtcattgacctgact
ggaagtcctgcaccaggtatggagttttcttctgttgacaaccccatatccttttttatc
cctgaaatggaaaaatatggcatgataaagtccaaaactgcaagaagattatcatttgac
aaaaaccatcagcctaagtttccaacaagtacagaaatttgctcaggttcaaatattcgg
aattctgtaaaagaccagaagaagagtttacatgttggagccagcaattcctcagatata
gatcttgaaaataatgctacatctttagacaaacgtaacaagcttttagaggattgtttc
aaacatagatctgctgaaaaatctcaagggttacagttccaagggaggaactcgtcactt
catggagatactccgctctcacatgccctccatttggccagtccgcaacaaaagtctcca
tggacaatggagtttcttaacaaaataaaggaaaagagtagaattcgtcatcagtccctt
ccttgtgacacagctgccccttgttttgggtgttcgggggatgtatcgaaagttaccaag
cgaagaagcccctccattcttgaatttttcaagtaccaaggaggcaacaatatgaggaag
ataccagaacaaaagaaacataagcgatctacacagttgagttcatcaaaagatgaaaaa
acttctgcctccactcttcccacatggacacctctagataaaagagcacggcagacacta
tcttttgcaaatgagggaaaaggccaaactaagctggtctggagtgatggaattcacaat
ccgagcaaaaagtttttccattaa
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