Halostagnicola larsenii: HALLA_01410
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Entry
HALLA_01410 CDS
T03008
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hlr
Halostagnicola larsenii
Pathway
hlr00061
Fatty acid biosynthesis
hlr00071
Fatty acid degradation
hlr01100
Metabolic pathways
hlr01212
Fatty acid metabolism
hlr02024
Quorum sensing
hlr04146
Peroxisome
Module
hlr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HALLA_01410
00071 Fatty acid degradation
HALLA_01410
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HALLA_01410
09145 Cellular community - prokaryotes
02024 Quorum sensing
HALLA_01410
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hlr01004
]
HALLA_01410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlr04147
]
HALLA_01410
Enzymes [BR:
hlr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HALLA_01410
Lipid biosynthesis proteins [BR:
hlr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HALLA_01410
Exosome [BR:
hlr04147
]
Exosomal proteins
Exosomal proteins of breast milk
HALLA_01410
Exosomal proteins of breast cancer cells
HALLA_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AHG01984
UniProt:
W0JTS4
LinkDB
All DBs
Position
unnamed2:289742..291409
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AA seq
555 aa
AA seq
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MTNLVTDVAETVATYPDSTAIAYQRSELTYEEFWERAGRFAQALDDRGIDEGDRVGIYLP
NLPQFVTAFYGTLRAGGIIVPMNPQYKAREISHMLGDSGAKAVVALSDLVPNVLEVRDDT
DVERIVSVGGNADGATEFGDFLADDTKEVVDRADDDVAVQPYTSGTTGTPKGVLLTHYNL
AFTTRANADVPPGGFEASDRLIGTLPLFHIYGMSVVMNGAMYSGGTYYPVPEWDTPAVMD
QLEEDGITIMFAVPAMFNDMINQPDAAEYEFEALRFANSGGSSLPMEVLDRFEELWGVQL
NEGYGLTETSPVTHANTNRNRRKGSIGQPLEGVEAKIVDSAERSSVDRSDADGPPQDEDF
EEVPRVEEGPIDEEEADLDAITGELVVHGPNVMKEYYGLPEANEESFTYEDGKRWFHTGD
IGYWDEDSFFYVVDREKHMIVTGGYNVYPREVEELLFEHEDVADAAVVGIPDERRGETVK
AFVVPASIASGSSSNEQSESDGVPTPDAGATPEDIKQYCLANLAEYKHPREVEFIEELPR
TTTGKVQKFELRDEG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatctcgtgacagacgttgccgagaccgtggcgacgtacccggattcgaccgcg
atcgcgtatcagagatccgaactgacctacgaggagttctgggagcgcgccgggcggttc
gcacaggctctggacgaccgcggcatcgacgagggcgaccgcgtcgggatctacctgccg
aacctgccgcagttcgtcacggccttctacggcacgctgcgcgccggcgggatcatcgtc
ccgatgaacccccagtacaaggctcgagagatcagccacatgctcggcgacagcggggcc
aaagcggtcgtcgcgctgtccgatctcgttccgaacgttctcgaggtacgggacgacacc
gacgtcgaacggatcgtcagcgtgggcggaaacgccgacggcgccaccgagttcggcgac
ttcctcgcggacgacaccaaggaggtcgtcgatcgggcggacgacgatgtcgcggtccag
ccctacacgtccgggacgaccggcactccaaagggcgtcctgttgacccactacaacctg
gcgttcacgacgcgggccaacgcagacgtcccgccgggcggcttcgaggcctccgaccgg
ctcatcggcacgctcccgttgttccacatctacggcatgtccgtcgtcatgaacggcgcg
atgtacagcggcgggacgtactaccccgtcccggagtgggacacaccggcggtcatggac
caactggaagaggacgggatcacgatcatgttcgctgtccccgcgatgttcaacgacatg
atcaaccagcccgacgccgccgagtacgagttcgaggcgcttcggttcgccaactccggc
ggctcgagcctcccgatggaggtgctcgaccggttcgaggagctgtggggcgtccagctc
aacgagggctacggcctaaccgagacgagcccggtcacgcacgcgaacacgaaccggaac
cgccggaagggaagcatcggccagcccctcgagggcgtcgaggcgaagatcgtcgatagc
gcggaacggagttccgttgatcgttcggacgccgatgggccgccccaagacgaggatttc
gaggaagtgccgcgcgtcgaggagggaccgatcgacgaggaggaggcggatctcgacgcg
atcacgggcgagctggtcgtccacggcccgaacgtgatgaaggagtactacggcctgccg
gaggccaacgaggagtcgttcacctacgaggacggcaagcgctggttccacaccggcgac
atcggctactgggacgaggattccttcttctacgtcgtcgaccgcgagaagcacatgatc
gtcaccggcggctacaacgtctacccgcgggaagtcgaggagctcctcttcgaacacgag
gacgtcgccgacgccgccgtcgtcgggatcccggacgagcgccgcggcgagacggtcaaa
gcgttcgtcgttcccgcgagcatcgcgagcgggagctcgtcgaacgagcaaagcgagtcc
gacggtgtccccacgccggacgccggagcgacgcccgaggacatcaaacagtactgtctg
gcgaacctcgccgagtacaagcatccccgcgaggtcgagttcatcgaggaactgccgcgg
acgacgaccggcaaggttcagaagttcgaactccgcgacgaaggctga
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