Halostagnicola larsenii: HALLA_02840
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Entry
HALLA_02840 CDS
T03008
Name
(GenBank) polygalacturonase
Organism
hlr
Halostagnicola larsenii
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
Pectate_lyase_3
DUF4957
PADR1_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AHG01336
UniProt:
W0JRJ8
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Position
unnamed:complement(153481..155142)
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AA seq
553 aa
AA seq
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MTESTPSSAWIRIGSETEADPERSSEKVTKRFQRAIEDCHECGGGTVAVSSGEYVIGTIR
LRSNVTLRLEAGAVVKPARSKDAYVDRHVGPDGERPFVLAEGVENVSIVGDGTIDGRGTE
FMRVDEPIRQHSGESEGHPLVSNAPHRARQGDDYLDRSGALEEWPIGKPAFRPGPLVLFD
DSAGVSVRNVTIRDSPAWTLCFDGCEDVDVRGLTVRNHMRIPNCDGIEIGNSSGVRIADS
AIESCDDAITIVSDEGKRDCEHLTVTNCSLSSSACAIKFGSETGGDIRNCTFSNCVVYGS
NRGLGIQHRDGGRIENVLFSDITVETRLLPGPWWGKAEPIYVTSVPRDEETDLGAVRNVR
FSNIVADAESGAFVYGHEEATLERVRLESVSLSIGGSPHADAVGGNADIQPTAVTAPIYE
EEISGVHCENVTDLELHDISIEWGENLPAYFAHGIRCLETDGVVIDGFAGRQARRAQAAA
DSAELDAAIVLEDCERTSVANSRAADGTDTFLSVRNCRDGRLFSNNDLVAAETPVDGDWK
FRTTGNVPPVSDE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcgacaccgtcgagcgcctggattcgaatcggttcggagaccgaagccgac
ccggagcgctcgagcgagaaggtcacgaaacggttccagcgtgccatcgaagactgccac
gagtgcgggggcggaacggtcgccgtctcgagcggcgagtacgtgatcgggacgattcgg
cttcgctcgaacgtaacccttcggctcgaggcgggggcggtcgtgaaaccggcacgatcg
aaggacgcgtacgtcgaccgccacgtgggtccggacggcgaacgcccgttcgtcctcgcg
gagggcgtcgagaacgtctcgatcgtcggcgacgggacgatcgacggtcgcggcaccgag
ttcatgcgcgtcgacgaaccgattcgccagcactcgggagaaagcgaggggcatccgctc
gtctcgaacgctccccaccgcgctcgacagggagacgactatctcgatcgctccggggcg
ctcgaggagtggcccattgggaagcccgcttttcggccggggccgctggtgttgttcgac
gattcggcgggcgtttcggttcgcaacgtcacgatccgcgactcgccggcgtggacgctc
tgtttcgacggctgcgaagacgtcgacgttcgcgggctgaccgtccgcaaccacatgcgg
attcccaactgcgacgggatcgagatcggcaactccagtggcgttcgcatcgccgacagc
gcgatcgagtcctgcgacgacgccatcacgatcgtttcggacgagggaaaacgggactgc
gaacacctgaccgtgaccaactgttcgctctcttctagcgcgtgtgcgatcaagttcggt
tcggaaaccggcggcgacattcgcaactgtacgttctcgaactgcgtcgtctacggctcg
aatcgggggctgggtatccaacaccgcgacgggggtcggatcgagaacgtgctgttctcg
gatatcacggtcgaaacgcggctgctccccggcccgtggtgggggaaagccgaaccgatc
tacgttacttccgttccgcgcgacgaggaaaccgacctcggcgcggtcaggaacgtccga
ttctcgaatatcgtcgccgacgcggaaagcggcgcgttcgtctacggacacgaggaagcg
accctcgagcgggttcgcctcgagtcggtttcgctgtcgatcggaggaagtccccacgct
gacgccgtcggcgggaacgcggatatacagccgaccgcggtcacggcgccgatctacgag
gaggagatttccggcgtgcactgcgagaacgtcaccgacctcgaactgcatgacatttcc
atcgagtggggcgagaacctgccggcgtacttcgcccacggaattcgatgcctcgagacc
gacggtgtggtcatcgatggcttcgcgggtcgacaggccaggcgggcccaagcggcggcg
gattcggccgaactagacgccgcgatagtgctcgaagactgcgagcgaacgagcgtcgcg
aattctcgagcggcggacggaacggacacgttcctctcggttcgaaactgtcgcgacggc
cggctgttctcgaacaacgacctcgtggcggccgaaactcccgtcgatggcgattggaag
ttccgcacaacgggcaacgtgccaccggtttcagacgagtga
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