Halostagnicola larsenii: HALLA_04215
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Entry
HALLA_04215 CDS
T03008
Name
(GenBank) transcriptional regulator, TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlr03000
]
HALLA_04215
Transcription factors [BR:
hlr03000
]
Prokaryotic type
Helix-turn-helix
Other families
HALLA_04215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
PLDc_2
MarR
HTH_24
PadR
HTH_IclR
HTH_5
MarR_2
DUF7343
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
AHG01610
UniProt:
W0JWI7
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All DBs
Position
unnamed:460228..461301
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AA seq
357 aa
AA seq
DB search
MNRDTLADTLEDAGLSPYQADAFVTLLERGSASATDIAKASSVPDARIYDVLRDLEEDGY
IETYEQDSLHARAHDPSDVLSDLRARADRFNTAADEIEDRWSRPALEDHKVSIVKRLDTV
LARTDELIRSAEDQVKIAVTIGQFDELSDALAAAYERGVNVKVCLSTMDDDPSLPDDSVF
ETTCTEARYRKLPSPFLALIDRSWACFSPHGRSTDQYSIIVNDLTYAYVFHWYFLTGLWE
FHESVYSERRDGEPITYVDMRQCVRDIEPLLEDGASIEATVHGFDTETGRELTLEGTITD
ATYAGINAADEREATISQLAGKVSITLETDGGTYTVGGWSALLEDVEATKITIGSLE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagacacgttagccgacacgctcgaggatgcgggcctgtcgccctatcaggcc
gacgcgttcgtgaccttgctcgagcgcggctcggcttcggcgaccgacatcgcgaaggcg
agttcggtccccgacgcgcggatctacgacgtcttgcgcgacctcgaggaggacggctac
atcgaaacgtacgagcaagatagcctccacgcacgcgctcacgaccccagcgacgtgctc
tcggatctgcgggcgcgagcggaccggttcaacaccgccgcggacgaaatcgaggatcgg
tggagtcgcccggccttagaagatcacaaggtgagcatcgtcaagcgtctcgatacggtg
ctcgcccgaaccgacgagctgattcgatcggcagaggatcaggtgaaaatcgcagtgacg
atcgggcagttcgacgaactgtctgacgcgctcgcggcagcctacgagcgcggggtcaac
gtgaaagtctgtctgtccacgatggacgatgatccgtcgctgccggacgattcggtgttc
gaaacgacgtgtacggaagcgcgataccgcaaactcccctcgccgttcctcgcgctgatc
gaccggtcgtgggcctgtttttccccacacggacgtagcacggatcagtacagcatcatc
gtcaacgacctcacctacgcctacgtctttcactggtactttcttacgggcctctgggag
ttccacgagtcggtgtactcagagcgacgcgatggggaaccgatcacgtacgtcgacatg
cgccagtgtgtcagggatatcgagccgttgctcgaggacggggcatcgatcgaggcgacc
gtccacgggttcgatacggaaacgggccgcgagttaacgctcgaggggacgatcacggat
gccacctacgcgggaatcaacgcggcggacgagcgggaagcgacgatctcacagctcgcg
ggaaaagtgtcgattaccctcgagaccgacgggggaacctacactgtcggcggctggtcg
gcgctgctcgaggacgtcgaagcgaccaagattacgatcggctcgctcgagtaa
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