Halostagnicola larsenii: HALLA_05080
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Entry
HALLA_05080 CDS
T03008
Symbol
radA
Name
(GenBank) DNA repair and recombination protein RadA
KO
K04483
DNA repair protein RadA
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_05080 (radA)
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
HALLA_05080 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_5
AAA_25
HHH
RecA
HHH_2
DNA_pol_lambd_f
Cdd1
ATPase
IMS_HHH_1
IMS_HHH
ATPase_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHF98344
UniProt:
W0JMG4
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Position
78213..79244
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AA seq
343 aa
AA seq
DB search
MADVNLETLPGVGPATADKLYDAGFDSFQSLAVASPSELSNTADVGESTASDIVRAARDE
ADIGGFETGSTVLERRNEIGKLSWHIDEVDELLGGGIETQSITEVYGEFGAGKSQVTHQM
AVNVQLPKEVGGLHGSVIFVDSEDTFRPERIDDMVRGLPDEAIEAALEDREIEGSADDET
ALEALVEDVLEKIHVAKAFNSNHQMLLAEKAKELASEQEDSEYPVRLLCIDSLTAHFRAE
YVGRGNLADRQQKLNKHLHDIDKVGNLYNAAVIVTNQVASNPDSFFGDPTQPIGGNILGH
KSTFRIYLRKSKADKRIVRLVDAPNLADGEGVMRVQDEGLKPE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtaaacctcgaaacgctccctggcgtcggaccggcaaccgcagacaaactc
tacgacgcaggctttgattccttccagagtctggccgtcgcctctccttccgaactctcg
aacacggccgacgtcggcgaatccaccgcgagcgatatcgttcgcgcggcccgcgacgaa
gccgatatcggcggcttcgaaaccggatcgaccgtcctcgagcgacggaacgagatcggg
aaactcagctggcacatcgacgaggtcgacgaattgctcggcggcggaatcgagacccag
tcgatcaccgaagtgtacggcgagttcggtgccgggaagtcccaggtaacccaccagatg
gccgtcaacgtgcaactgccgaaggaggtcggcggcctccacgggagcgtcatcttcgtg
gactccgaggacacgttccgtccggaacggatcgacgacatggttcgtggcctcccggac
gaggcgatcgaagccgccctcgaggaccgcgaaatcgaaggctcggccgacgacgaaaca
gccctcgaggccctcgtcgaggacgtcctcgagaagatccacgtcgcgaaggcgttcaac
tcgaaccaccagatgctgctggccgagaaggcgaaggaactcgcgagcgagcaggaagat
tccgagtatccggttcgactgctctgtatcgactcgctgaccgcccacttccgtgcggag
tacgtcggtcgtggcaacctcgccgaccgacagcagaaactcaacaagcacctccacgac
atcgacaaggtcggcaacctctacaacgccgcggtcatcgtcaccaaccaggtcgcctcg
aaccccgattcgttcttcggcgacccgacccagccgatcggtggcaacatcctcggccac
aagtccaccttccgcatctacctccgcaaatccaaagccgacaagcggatcgtccgactg
gtcgatgcgccgaacctcgccgacggcgagggcgtgatgcgtgtccaggatgagggactg
aagccggagtaa
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